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@@ -1,62 +0,0 @@
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# Projected explosion: isolated spatial-interpolation experiment
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Historical baseline: `9805383f9c50d867e8555471baf5dbda8333a652`. This candidate does not replace or relabel its results. The TG runner records the actual candidate revision, dirty state, source hash and harness hashes, plus the historical baseline revision and selected explosion scheme.
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Default remains `constant`. Explicit `explosion="projected_linear"` supports only a periodic, body-free, two-level, fully blocked single rectangle (window or singleton union representation). Dense, multilevel, multi-rectangle and body/Jet cases are rejected. Constructor guards have been statically reviewed; GPU construction is not yet exercised.
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For each population, form a centered gradient only where both axis neighbors are original explosion donors, owned and uncovered. Otherwise set that axis derivative to zero. Project the gradient perpendicular to the population lattice direction (rest population retains its gradient), then evaluate at child offsets ±1/4 coarse cell. Read owner cores, never stale block halos. Repeating the donor for a missing axis avoids invalid reads. All neighbor reads remain within the original coarse transfer footprint.
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Timing, two ghost-only streaming hops, four-child coalescence, relaxation, shifted-storage convention, bulk collision and legacy constant kernel are unchanged. There is no NEQ rescaling, limiter, time interpolation or new framework. Projection commutes with subtracting the constant lattice weights.
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Method attribution: Schornbaum and Rüde, [arXiv:1508.07982](https://arxiv.org/pdf/1508.07982), Algorithm 2; Chen et al., Physica A 362 (2006) 158–167, [DOI 10.1016/j.physa.2005.09.036](https://doi.org/10.1016/j.physa.2005.09.036). Independently implemented mathematical stencil, with no GPL implementation copied. The Chen full text was not directly audited in this experiment.
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## CPU checks
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Run `PYTHONPATH=src python -m unittest discover -s tests/unit -p test_projected_explosion.py -v`.
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- Constant populations, affine available-axis gradients, characteristic constancy, quartet means and shift invariance.
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- Original donor footprint only; poison covered cells and check finite reconstruction.
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- Both window and singleton-union layouts, centered/off-axis/minimal near-edge rectangles.
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- Eight complete intervals, identity and SRT collision: actual fine pulls and coarse restriction tables, all eight grazing corner paths included; composite mass and both momentum components conserved within 2e-12 FP64 absolute tolerance.
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- Actual CUDA kernel body compiled with a CPU C++ shim: blocked address mapping, FP32 shifted/unshifted inputs, poisoned halo/covered storage, independent NumPy parity. This checks arithmetic and indexing, not CUDA compilation or execution.
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- Unprojected reconstruction is distinguished by failure of characteristic constancy. It need not fail global mass conservation in this geometry.
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## Next diagnostic, only on authorized Horsea GPU
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Use the same candidate checkout for paired Re100 N64 depth2 runs, differing only in `--explosion constant` versus `--explosion projected_linear`:
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`python tests/validation/taylor_green/run_case.py --repo "$PWD" --re 100 --n 64 --depth 2 --explosion projected_linear --output <new-result-path>`
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Select the physical CUDA device explicitly. Never overwrite historical reports. Compare frozen TG error gates and full trajectories, including mass, energy, pressure and velocity. Amplitude/nonmodal shape decomposition can inform mechanism but cannot substitute for the gates. First establish CUDA compilation and CPU/device parity, then paired end-to-end budgets. The CPU diagnostic below establishes improvement only in its FP64 reference trajectories; it does not establish production suitability or a candidate GPU pass.
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## Local verification limits
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Focused candidate/refinement/block-layout/build-contract checks pass (62 unittest tests). Full unittest discovery is not green: the attempted 200-test run reports 18 missing-dependency/import errors and three historical source-pin refusals (jet-circle and LES guards), plus one skipped test. Those pin refusals correctly reject the changed `blocks.cu`; their immutable fixtures were not weakened or rewritten. Python syntax checks and `git diff --check` pass. No candidate CUDA build, device execution, GPU performance or GPU TG improvement has been established.
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## Donor-support audit
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The current support is exactly the original two-coarse-cell-wide explosion ring. Centered normal derivatives therefore vanish along straight faces: the inner donor lacks an uncovered inward neighbor, and the outer donor lacks a third-ring outward neighbor. This is an explicit limitation, not evidence of a missing donor layer. Independent inspection of the authors' [LinearExplosion implementation](https://github.com/lssfau/walberla/blob/master/src/lbm/refinement/LinearExplosion.h) found the same two-cell directional slabs and both-neighbors-valid condition; their union equals all 368 distinct donors in the N64 TG geometry. No upstream code was copied. This does not claim identical block-local tangential fallback at every fine/fine block seam.
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A separate read-only dependency trace compared the ring to all uncovered periodic parent neighbors for four rectangles. Wider support changed some unused outer ghost populations but none consumed by final fine ACTIVE outputs or coarse restriction through the two hops, including full collision dependencies. Widening the support is not part of this candidate.
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## Reproducible CPU Taylor–Green A/B
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Run from this checkout, with NumPy and Python installed:
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`python tests/validation/taylor_green/run_cpu_explosion.py --repo "$PWD" --n 32 --output-dir /tmp/explosion-ab`
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Repeat with `--n 64` for the second retained case. These are the only supported grids. The script reuses unchanged CPUREF `advance_coarse_once`, existing TG initialization/metrics, actual singleton-rectangle transfer tables, and the tested projected reconstruction. The rectangular adapter verifies its coalescence children against the production table and includes all eight grazing-corner links. Only the explosion operation differs within each pair.
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The reference stores physical FP64 arrival populations; production stores shifted FP32 postcollision populations. Collision preserves the macroscopic moments compared here, and initialization is equilibrium. This supports a macro-trajectory comparison, not population-by-population/device equivalence. Outputs record actual checkout/harness provenance and hashes of both imported diagnostic helpers. The compact retained `tests/validation/taylor_green/cpu_explosion_summary.json` records original N32/N64 results and historical GPU report hashes, without importing those reports into this branch.
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At Re100, depth 2, t*=0.48:
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| Root N | Velocity L2, constant → projected | Pressure L2 | Orthogonal velocity residual |
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|---|---|---|---|
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| 32 | 3.24942% → 1.52264% | 8.98696% → 4.85601% | 2.28814% → 0.98615% |
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| 64 | 1.13113% → 0.49304% | 3.55050% → 1.65801% | 0.93699% → 0.40289% |
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Across sampled times, constant CPU versus historical constant GPU differs by at most 6.93e-8 in velocity L2 and 3.58e-6 in pressure L2 for N32; 1.74e-8 and 8.64e-7 for N64. Relative mass drift remains below 1.42e-13 and absolute momentum change below 2.11e-13 in these CPU pairs. Independent N32 rerunning reproduced trajectory/error metrics exactly; recomputed quadrature-factor metadata agrees to roundoff.
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Amplitude is the volume-weighted projection onto the exact velocity field; the orthogonal residual isolates the remaining shape error. The energy decomposition includes the discrete composite-grid exact-energy quadrature factor recorded per row, not simply amplitude squared plus residual squared. These are bounded diagnostic improvements, not proof of complete method fidelity, uniform-grid accuracy equivalence or a validated CUDA implementation. Frozen production validation gates are unchanged.
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@@ -0,0 +1,52 @@
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# First-failure uniform SRT diagnostic (prepared, not executed)
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Purpose: locate the first physical failure in the unchanged uniform D80 SRT control that was healthy at executed step 160 and nonfinite at the next observation, executed step 320. The original failure's summary `steps=160` is the last accepted observation, not the last executed step. This diagnostic does not select different numerical parameters, run an AMR case or perform a new benchmark campaign.
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## Exact source and configuration
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The default source is the containing repository (override with `--source`); the exact pinned production/runtime source is commit `9805383f9c50d867e8555471baf5dbda8333a652`. The manifest pins production files and the helper/runner dependencies directly against the original failure's `source_before.json`. All pinned contents match. Import guards require CelerisLab and the runner from the selected pinned checkout.
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The script calls the original `run_refined_dfg.config(helper,80)` factory and unchanged `Simulation(...).initialize()`. Thus it retains D80, U=.01, ν=.008, τ=.524, ω≈1.9084, shifted FP32, SRT, double buffer, parabolic local Zou–He inlet, all-nine pressure-NEQ damping .5, backflow clamp disabled, identical cylinder geometry and initialization. No clipping, equilibrium rewrite or solver patch is added.
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The inlet overload in this source may differ by FP32 rounding from older d79 code even where the algebra matches; that is not changed here and is not established as the cause of failure. MRT's outlet branch also differs. Neither prior MRT success nor this diagnostic establishes an SRT/outlet/body attribution.
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## Observation and stop contract
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- At most 320 actual solver steps, starting from the original fresh initialization. Stop at the first physical health failure (or wall deadline).
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- Read the production macroscopic path, its decoded populations, and force after every completed step. Preserve the actual executed count separately from the last observed count.
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- Independently report nonfinite physical populations, nonfinite physical macros and nonfinite reaction. Apply the original density [.5,1.5] and Mach≤.2 checks to physical FLUID nodes. A new population-only check may stop earlier than the original macro-only health check; the report explicitly distinguishes it.
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- Per-step `Simulation.run(1)` resets/reads the observation buffer for a one-step force window. This changes observation cadence and force accumulation windows, not configuration or fluid updates. A cumulative-force-only overflow from the original 100/60-step batching would not be reproduced identically; that limitation is explicit. Original macro warnings already show nonfinite populations/macros, so this instrument prioritizes locating the physical failure.
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- Ghost/inactive/body-solid populations are reported in separate categories; their NaNs do not independently trigger physical failure. Category masks are disjoint and complete. Boundary subtypes are decoded as the nibble, not mistaken for independent bit flags.
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- Physical region labels are body-near (within radius+3 cells), outlet/inlet-near (three fluid columns), wall-near (three fluid rows), and remaining bulk. These locate symptoms, not causal mechanisms.
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- Initial, preceding and firstbad/final compact reports retain category counts, finite global extrema and positions, the first 16 offending nodes in row-major order, their bad q indices/all populations, and up to four 5×5 population/flag neighborhoods. “First” identifies earliest sampled step; within that step the list is row-major, not an asserted temporal order among GPU threads.
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## Bounded evidence
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Only the immediately preceding and firstbad/final active-buffer states are retained. `states.npz` contains their exact raw shifted FP32 values, production-decoded FP32 populations and step numbers, plus flags. This is ~81 MiB at the exact D80 shape, with a 128 MiB artifact limit enforced. There are no saved field trajectories. Initial conditions are reproducible from the source/config; only their diagnostic summary is retained.
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These are diagnostic snapshots, not full restart checkpoints (spare buffers and observation/control state are not a restart bundle). `diagnostics.json` stores nonfinite numbers as explicit `NaN`, `+Inf`, `-Inf` strings and is strict finite JSON; NPZ preserves actual IEEE values. A force-only failure can have no offending fluid node. A clean cap means no sampled failure through 320, not benchmark acceptance.
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## CPU validation
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```sh
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python tests/validation/uniform_srt_diagnostic/test_diagnostic.py
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python tests/validation/uniform_srt_diagnostic/diagnose_uniform_srt.py --output /tmp/new-srt-preflight
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```
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Seven CPU-only tests pass: source/config, complete category partition, inactive nonfinite exclusion, independent population/macro/force reasons, health thresholds, bounded two-state artifact writing, and deadline/source guards. `py_compile` and the real-source default preflight pass. No CUDA import is required by preflight/tests and no GPU was executed here.
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## Root-only admitted execution
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After independent review and root GPU admission:
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```sh
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CUDA_VISIBLE_DEVICES=<admitted-device> timeout --signal=TERM --kill-after=30s <hard-budget>s python tests/validation/uniform_srt_diagnostic/diagnose_uniform_srt.py --source <exact-9805383-checkout> --execute --gpu-admitted --wall-seconds <soft-budget> --output <new-output-directory>
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```
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The external watchdog is required for a blocked CUDA call; cooperative wall checks cannot interrupt one. Budget should allow per-step downloads and ~81 MiB evidence writing; this diagnostic is not a performance measurement. The step ceiling cannot be increased by a CLI flag. `READY` is emitted after the first completed step and all observation paths. First physical failure is expected diagnostic evidence and returns exit 2; step cap returns 0. `preflight.json` records the pre-execution configuration, not a completion receipt.
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Original failure files, production source, original pilot runner and gates are untouched. This test-only handoff is based on exact commit 9805383; added diagnostic files are not part of the historical failure source manifest.
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## Historical reporting undercount (not changed here)
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The failed pilot executed to step 320 before its second observation failed. Its summary `steps=160` reflects `begin`, which advances only after an accepted observation. This is a reporting undercount, not evidence that the second batch did not execute. The original failure package and runner/gates are preserved unchanged. This diagnostic records both `executed_steps` and `observation_step`, and labels previous-state steps explicitly. Fixing the historical runner's reporting is a separate change.
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@@ -60,39 +60,6 @@ extern "C" __global__ void BlockExplode(
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to[index_f(t % TOTAL_CELLS, q)] = from[q * coarse_cells + d % coarse_cells];
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}
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// Experimental Schornbaum--Ruede (arXiv:1508.07982, Algorithm 2)
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// and Chen et al. (doi:10.1016/j.physa.2005.09.036) population interpolation.
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// Independent implementation of the mathematical stencil; no upstream source copied.
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// Stencil cells are owner cores; a disabled axis repeats its center twice.
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extern "C" __global__ void BlockExplodeProjected(
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const fpxx* coarse, fpxx* fine, const uint64_t* target, const uint64_t* donor,
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unsigned int count, unsigned long coarse_cells,
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const uint64_t* neighbors, const float* offsets)
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{
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unsigned int row = blockIdx.x * blockDim.x + threadIdx.x;
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if (row >= count) return;
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const uint64_t t = target[row], d = donor[row];
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fpxx* to = fine + (t / TOTAL_CELLS) * NQ * TOTAL_CELLS;
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for (unsigned int q = 0; q < NQ; ++q) {
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float v[4];
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for (unsigned int a = 0; a < 4; ++a) {
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const uint64_t n = neighbors[4ul * row + a];
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v[a] = coarse[(n / coarse_cells) * NQ * coarse_cells
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+ q * coarse_cells + n % coarse_cells];
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}
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float gx = .5f * (v[1] - v[0]), gy = .5f * (v[3] - v[2]);
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const float ex = d_cx[q], ey = d_cy[q];
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if (q != 0) {
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const float along = (ex * gx + ey * gy) / (ex * ex + ey * ey);
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gx -= ex * along;
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gy -= ey * along;
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}
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to[index_f(t % TOTAL_CELLS, q)] =
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coarse[(d / coarse_cells) * NQ * coarse_cells + q * coarse_cells + d % coarse_cells]
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+ offsets[2ul * row] * gx + offsets[2ul * row + 1] * gy;
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}
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}
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// Targets are receiver-local SOURCE slots for the immediately following pull.
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// Keep child summation order identical to PatchCoarseStep; no collision here.
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extern "C" __global__ void BlockCoalesce(
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@@ -22,7 +22,7 @@ from .block_stepper import MAX_GRID_DIM
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from .hierarchy import build_hierarchy, is_rectangle
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from .refinement import ACTIVE, HALO, FixedPatch2D, FixedPatchSet2D, prepare_fine_boundary
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from .refinement_tables import (blocked_base_tables, blocked_fine_tables, # noqa: F401 (re-export)
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blocked_kind, projected_explosion_tables, _prepare_blocked_boundary,
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blocked_kind, _prepare_blocked_boundary,
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BLOCKED_BOUNDARY_DEVICE_COLUMNS)
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from .descriptors import SOLID
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from .raw_exchange import summarize_exchange
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@@ -41,7 +41,6 @@ class _Pair:
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n_ghosts: int
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n_rows: int
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parent_cells: int # parent block window cells (explode donor stride)
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interpolation: tuple = () # optional neighbor/offset device tables
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@dataclass
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@@ -217,7 +216,7 @@ class FixedPatchStepper:
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fine_block=None, base_block=None, jets=(), child=None, child_block=None,
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child_objects=(), child_jets=(), child_rectangles_in_parent=None,
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refinements=None, level_blocks=None, level_objects=None, level_jets=None,
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observe_raw_exchange=False, explosion="constant"):
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observe_raw_exchange=False):
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if HALO != 4:
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raise RuntimeError("refinement.cu requires a four-cell fine halo")
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if coarse_boundary not in ("periodic", "slot_reservoir", "channel"):
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@@ -246,15 +245,6 @@ class FixedPatchStepper:
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level_blocks = [None if b is None else tuple(b) for b in level_blocks]
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_check_levels(refinements, level_blocks, level_objects, level_jets)
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depth = len(refinements) + 1
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if explosion not in ("constant", "projected_linear"):
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raise ValueError("explosion must be constant or projected_linear")
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if explosion == "projected_linear" and (
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depth != 2 or coarse_boundary != "periodic"
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or any(b is None for b in level_blocks)
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or any(level_objects) or any(level_jets)
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or not (is_rectangle(refinements[0]) or len(refinements[0]) == 1)):
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raise ValueError("projected explosion requires periodic two-level blocked single rectangle without bodies/Jets")
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self._explosion = explosion
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self._ddf_shifting = bool(cfg.ddf_shifting)
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if self._ddf_shifting and any(b is None for b in level_blocks):
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raise ValueError("shifted populations require all-blocked levels; dense/mixed is unsupported")
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@@ -477,10 +467,6 @@ class FixedPatchStepper:
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self._upload(children), len(ghosts), len(targets),
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int(np.prod(pair.coarse_shape if parent.layout is None
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else parent.layout.local_shape)))
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if self._explosion == "projected_linear":
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neighbors, offsets = projected_explosion_tables(pair, parent.layout)
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result.explode = child.module.get_function("BlockExplodeProjected")
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result.interpolation = (self._upload(neighbors), self._upload(offsets))
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if child.layout is not None:
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child.kind = self._upload(blocked_kind(child.layout, self.hierarchy.kinds[index + 1]))
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if index == 0 and base is not None:
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@@ -745,7 +731,7 @@ class FixedPatchStepper:
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"""Explode from the given parent buffer, then two hops of level ``index``."""
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pair, level = self._pairs[index - 1], self._levels[index]
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pair.explode(parent_buffer, level.current, pair.ghosts, pair.donors, np.uint32(pair.n_ghosts),
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np.uint64(pair.parent_cells), *pair.interpolation,
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np.uint64(pair.parent_cells),
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grid=((pair.n_ghosts + self._block[0] - 1) // self._block[0], 1), **kw)
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self._hop(index, level.current, level.spare, **kw)
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self._hop(index, level.spare, level.current, **kw)
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@@ -66,40 +66,6 @@ def blocked_base_tables(patch, layout, order, wall_aware=False, *, composed_kind
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blocked_kind(layout, dense_kind))
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def projected_explosion_tables(patch, layout):
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"""Experimental periodic single-rectangle stencil, owner-core cell IDs.
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Schornbaum & Rüde (2016), arXiv:1508.07982, Algorithm 2 explosion
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interpolation, following Chen et al., Physica A 362 (2006), 158-167,
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doi:10.1016/j.physa.2005.09.036: centered gradients, perpendicular projection,
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and child offsets +/-1/4. Independently implemented from the mathematics.
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Only original explosion donors may supply gradients: this preserves the
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existing coarse transfer footprint. Missing axis pairs use center twice.
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Caller must restrict use to two periodic, body-free blocked levels.
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"""
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if hasattr(patch, "patches") and len(patch.patches) != 1:
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raise ValueError("projected explosion requires one rectangle")
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ny, nx = patch.coarse_shape
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donor = patch.ghost_coarse.astype(np.intp)
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legal = np.zeros(ny * nx, bool)
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legal[donor] = True
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legal &= layout.owned.ravel() & ~patch.covered.ravel()
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if not legal[donor].all():
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raise ValueError("projected explosion donors must be owned uncovered cells")
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y, x = np.divmod(donor, nx)
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neighbors = np.repeat(donor[:, None], 4, axis=1)
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for axis, (dx, dy) in enumerate(((1, 0), (0, 1))):
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minus = ((y - dy) % ny) * nx + (x - dx) % nx
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plus = ((y + dy) % ny) * nx + (x + dx) % nx
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valid = legal[minus] & legal[plus]
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neighbors[valid, 2 * axis] = minus[valid]
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neighbors[valid, 2 * axis + 1] = plus[valid]
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fy, fx = np.divmod(patch.ghost_fine, patch.fine_shape[1])
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offsets = np.column_stack((fx % 2, fy % 2)).astype(np.float32) * .5 - .25
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return (np.ascontiguousarray(layout.owner.ravel()[neighbors], dtype=np.uint64),
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np.ascontiguousarray(offsets))
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# Required device columns plus optional actuation; observation arms are uploaded
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# separately only when enabled. body_id/aperture remain host reduction metadata.
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BLOCKED_BOUNDARY_DEVICE_COLUMNS = ("block", "cell", "dir", "q", "fallback", "surface_velocity")
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@@ -1,204 +0,0 @@
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"""CPU stencil and actual closed-interface packet budgets; no CUDA claims."""
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import numpy as np
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import unittest
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from pathlib import Path
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import shutil
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import subprocess
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import tempfile
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from CelerisLab.config import LBMConfig
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from CelerisLab.lbm.blocks import BlockLayout2D
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from CelerisLab.lbm.descriptors import D2Q9_EX, D2Q9_EY
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from CelerisLab.lbm.refinement import FixedPatch2D, FixedPatchSet2D, ACTIVE, OUTER_GHOST
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from CelerisLab.lbm.refinement_tables import projected_explosion_tables
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E = np.array([D2Q9_EX, D2Q9_EY]).T
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W = np.array([4/9] + [1/9]*4 + [1/36]*4)
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def setup(union=False, bounds=(4, 4, 12, 12)):
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cfg = LBMConfig(nx=16, ny=16, viscosity=.1)
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p = (FixedPatchSet2D.from_config(cfg, [bounds]) if union else
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FixedPatch2D.from_config(cfg, bounds))
|
||||
layout = BlockLayout2D.build(16, 16, 4, 4, periodic=(True, True))
|
||||
neighbors, offsets = projected_explosion_tables(p, layout)
|
||||
inverse = np.full(layout.nblocks * np.prod(layout.local_shape), -1, dtype=int)
|
||||
inverse[layout.owner.ravel()] = np.arange(256)
|
||||
return p, inverse[neighbors], offsets
|
||||
|
||||
|
||||
def reconstruct(c, p, neighbors, offsets, project=True):
|
||||
# Independent NumPy evaluation of the documented stencil; neighbors have
|
||||
# been decoded from actual blocked owner IDs, not recomputed geometry.
|
||||
values = c.reshape(9, -1)[:, neighbors]
|
||||
g = .5 * (values[:, :, 1::2] - values[:, :, ::2])
|
||||
if project:
|
||||
g[1:] -= (np.einsum('qra,qa->qr', g[1:], E[1:]) /
|
||||
np.sum(E[1:]**2, axis=1)[:, None])[:, :, None] * E[1:, None, :]
|
||||
out = c.reshape(9, -1)[:, p.ghost_coarse] + np.einsum('qra,ra->qr', g, offsets)
|
||||
return out, g
|
||||
|
||||
|
||||
def check_legal_footprint_mean_and_characteristic(union, bounds):
|
||||
p, neighbors, offsets = setup(union, bounds)
|
||||
assert set(neighbors.ravel()) <= set(p.ghost_coarse)
|
||||
assert not p.covered.ravel()[neighbors].any()
|
||||
assert (neighbors >= 0).all()
|
||||
c = np.random.default_rng(72).normal(size=(9,16,16))
|
||||
c[:, p.covered] = np.nan # poison every forbidden donor
|
||||
out, g = reconstruct(c, p, neighbors, offsets)
|
||||
assert np.isfinite(out).all()
|
||||
np.testing.assert_allclose(np.einsum('qra,qa->qr', g, E), 0, atol=5e-16)
|
||||
for d in np.unique(p.ghost_coarse):
|
||||
rows = p.ghost_coarse == d
|
||||
assert rows.sum() == 4
|
||||
np.testing.assert_allclose(out[:, rows].mean(axis=1), c.reshape(9,-1)[:,d], atol=5e-16)
|
||||
for q in range(1,9):
|
||||
delta = offsets[rows, None, :] - offsets[None, rows, :]
|
||||
# Parallel displacements have zero 2D cross product.
|
||||
parallel = np.isclose(delta[...,0]*E[q,1]-delta[...,1]*E[q,0], 0)
|
||||
diff = out[q, rows][:,None]-out[q, rows][None,:]
|
||||
np.testing.assert_allclose(diff[parallel], 0, atol=5e-16)
|
||||
const = np.broadcast_to(W[:,None,None], (9,16,16)).copy()
|
||||
constant, _ = reconstruct(const,p,neighbors,offsets)
|
||||
np.testing.assert_array_equal(constant, np.broadcast_to(W[:,None], constant.shape))
|
||||
|
||||
|
||||
def collide(f, tau):
|
||||
rho = f.sum(axis=0)
|
||||
u = np.einsum('qa,q...->a...', E, f) / rho
|
||||
cu = np.einsum('qa,a...->q...', E, u)
|
||||
eq = W[:,None] * rho * (1 + 3*cu + 4.5*cu**2 - 1.5*np.sum(u*u,axis=0))
|
||||
return f + (eq-f)/tau
|
||||
|
||||
|
||||
def totals(c, f, p):
|
||||
q = c[:,~p.covered].sum(axis=1)+.25*f[:,p.fine_kind==ACTIVE].sum(axis=1)
|
||||
return np.r_[q.sum(), E.T@q]
|
||||
|
||||
|
||||
def check_full_two_hop_closed_corner_budget(union, collision, bounds):
|
||||
p, neighbors, offsets = setup(union,bounds)
|
||||
rng=np.random.default_rng(17)
|
||||
c=W[:,None,None]*(1+rng.normal(0,.002,(9,16,16)))
|
||||
f=W[:,None,None]*(1+rng.normal(0,.002,(9,*p.fine_shape)))
|
||||
start=totals(c,f,p)
|
||||
# Count exactly the eight coarse diagonal links whose source is also
|
||||
# uncovered, but whose midpoint lies on the closed rectangular interface.
|
||||
q, k=np.divmod(p.coalesce_coarse.astype(np.int64),256)
|
||||
y,x=np.divmod(k,16)
|
||||
grazing=~p.covered[y-E[q,1],x-E[q,0]]
|
||||
assert grazing.sum()==8
|
||||
c[:,p.covered]=np.nan
|
||||
for _ in range(8):
|
||||
f.reshape(9,-1)[:,p.ghost_fine]=reconstruct(c,p,neighbors,offsets)[0]
|
||||
for _ in range(2):
|
||||
f=np.array([np.roll(f[q],(ey,ex),(0,1)) for q,(ex,ey) in enumerate(E)])
|
||||
f[:,p.fine_kind==OUTER_GHOST]=np.nan
|
||||
if collision:
|
||||
f[:,p.fine_kind==ACTIVE]=collide(f[:,p.fine_kind==ACTIVE],p.tau_fine)
|
||||
out=np.array([np.roll(c[q],(ey,ex),(0,1)) for q,(ex,ey) in enumerate(E)])
|
||||
packets=f.reshape(-1)[p.coalesce_fine].mean(axis=1)
|
||||
assert np.isfinite(packets[grazing]).all()
|
||||
out.reshape(-1)[p.coalesce_coarse]=packets
|
||||
if collision:out[:,~p.covered]=collide(out[:,~p.covered],p.tau_coarse)
|
||||
out[:,p.covered]=np.nan
|
||||
c=out
|
||||
np.testing.assert_allclose(totals(c,f,p),start,rtol=0,atol=2e-12)
|
||||
|
||||
|
||||
def check_projection_is_distinguished_by_characteristic_not_global_mass():
|
||||
p,n,o=setup()
|
||||
c=np.random.default_rng(8).normal(size=(9,16,16))
|
||||
_,g=reconstruct(c,p,n,o,project=False)
|
||||
assert np.max(abs(np.einsum('qra,qa->qr',g,E))) > .1
|
||||
|
||||
|
||||
def check_multiple_rectangles_rejected():
|
||||
cfg=LBMConfig(nx=24,ny=16,viscosity=.1)
|
||||
p=FixedPatchSet2D.from_config(cfg, [(4,4,8,12),(12,4,16,12)])
|
||||
layout=BlockLayout2D.build(16,24,4,4,periodic=(True,True))
|
||||
with unittest.TestCase().assertRaisesRegex(ValueError, 'one rectangle'):
|
||||
projected_explosion_tables(p,layout)
|
||||
|
||||
|
||||
class ProjectedExplosionTests(unittest.TestCase):
|
||||
def test_stencil(self):
|
||||
for union in (False, True):
|
||||
for bounds in ((4,4,12,12),(2,3,9,10),(2,2,3,3)):
|
||||
with self.subTest(union=union,bounds=bounds):
|
||||
check_legal_footprint_mean_and_characteristic(union,bounds)
|
||||
|
||||
def test_closed_interface(self):
|
||||
for union in (False,True):
|
||||
for collision in (False,True):
|
||||
for bounds in ((4,4,12,12),(2,3,14,12),(2,2,3,3)):
|
||||
with self.subTest(union=union,collision=collision,bounds=bounds):
|
||||
check_full_two_hop_closed_corner_budget(union,collision,bounds)
|
||||
|
||||
def test_projection(self):
|
||||
check_projection_is_distinguished_by_characteristic_not_global_mass()
|
||||
|
||||
def test_affine_and_shift_invariance(self):
|
||||
p,n,o=setup()
|
||||
y,x=np.indices((16,16))
|
||||
c=np.array([.7+q*.01+x*.03+y*.05 for q in range(9)])
|
||||
out,g=reconstruct(c,p,n,o)
|
||||
available=n[:,::2]!=n[:,1::2]
|
||||
gradient=np.array([.03,.05])*available
|
||||
expected=np.broadcast_to(gradient,(9,*gradient.shape)).copy()
|
||||
expected[1:]-=(np.einsum('qra,qa->qr',expected[1:],E[1:])/
|
||||
np.sum(E[1:]**2,axis=1)[:,None])[:,:,None]*E[1:,None,:]
|
||||
np.testing.assert_allclose(g,expected,atol=2e-16)
|
||||
shifted,_=reconstruct(c-W[:,None,None],p,n,o)
|
||||
np.testing.assert_allclose(out-W[:,None],shifted,atol=5e-16)
|
||||
|
||||
def test_reject(self):
|
||||
check_multiple_rectangles_rejected()
|
||||
|
||||
|
||||
class ProjectedKernelTests(unittest.TestCase):
|
||||
@unittest.skipUnless(shutil.which("g++"), "g++ is required for actual-kernel CPU arithmetic")
|
||||
def test_actual_kernel_fp32_shifted_and_unshifted(self):
|
||||
p, neighbors, offsets = setup(True)
|
||||
parent = BlockLayout2D.build(16,16,4,4,periodic=(True,True))
|
||||
child = p.fine_layout((8,4)) # deliberately unequal parent/child strides
|
||||
ids, offsets = projected_explosion_tables(p,parent)
|
||||
cells = int(np.prod(parent.local_shape))
|
||||
targets = child.owner.ravel()[p.ghost_fine]
|
||||
donors = parent.owner.ravel()[p.ghost_coarse]
|
||||
source = (Path(__file__).resolve().parents[2] /
|
||||
"src/CelerisLab/lbm/kernels/blocks.cu").read_text()
|
||||
kernel = source.split('extern "C" __global__ void BlockExplodeProjected(',1)[1]
|
||||
kernel = 'void BlockExplodeProjected(' + kernel.split('// Targets are receiver-local SOURCE slots',1)[0]
|
||||
def array(name, values, kind):
|
||||
v = np.asarray(values).ravel()
|
||||
text = ','.join(str(int(x)) if kind=='uint64_t' else float(x).hex()+'f' for x in v)
|
||||
return f"{kind} {name}[] = {{{text}}};\n"
|
||||
for shifted in (False,True):
|
||||
c=np.random.default_rng(11).normal(0,.001,(9,16,16))
|
||||
if not shifted:c+=W[:,None,None]
|
||||
c=c.astype(np.float32)
|
||||
packed=np.full(parent.nblocks*9*cells,np.nan,np.float32)
|
||||
for q in range(9):packed[parent.slot(parent.owner.ravel(),q)]=c[q].ravel()
|
||||
# All halo/covered inputs are poisoned; kernel must use legal cores.
|
||||
for q in range(9):packed[parent.slot(parent.owner.ravel()[p.covered.ravel()],q)]=np.nan
|
||||
# Hex initializer needs a portable expression for poisoned NaNs.
|
||||
data=array('coarse',packed,'float').replace('nanf','NAN')
|
||||
code = '#include <cstdint>\n#include <cmath>\n#include <cstdio>\nusing fpxx=float;\n'
|
||||
code += f'constexpr unsigned NQ=9, TOTAL_CELLS={int(np.prod(child.local_shape))};\n'
|
||||
code += 'struct Id {unsigned x;}; Id blockIdx{0},blockDim{1},threadIdx{0};\n'
|
||||
code += 'unsigned index_f(unsigned k,unsigned q){return q*TOTAL_CELLS+k;}\n'
|
||||
code += 'int d_cx[]={0,1,-1,0,0,1,-1,1,-1},d_cy[]={0,0,0,1,-1,1,-1,-1,1};\n'+kernel
|
||||
code += data+array('target',targets,'uint64_t')+array('donor',donors,'uint64_t')
|
||||
code += array('neighbor',ids,'uint64_t')+array('offset',offsets,'float')
|
||||
code += f'float fine[{child.nblocks*9*int(np.prod(child.local_shape))}]={{}};\n'
|
||||
code += f'int main(){{for(unsigned r=0;r<{len(targets)};++r){{threadIdx.x=r;BlockExplodeProjected(coarse,fine,target,donor,{len(targets)},{cells},neighbor,offset);}}'
|
||||
code += f'for(unsigned q=0;q<9;++q)for(unsigned r=0;r<{len(targets)};++r){{auto t=target[r];printf("%.9g\\n",fine[(t/TOTAL_CELLS)*9*TOTAL_CELLS+q*TOTAL_CELLS+t%TOTAL_CELLS]);}}}}'
|
||||
with tempfile.TemporaryDirectory() as folder:
|
||||
src=Path(folder)/'kernel.cpp'; binary=Path(folder)/'kernel'
|
||||
src.write_text(code)
|
||||
subprocess.run(['g++','-std=c++17','-O2',str(src),'-o',str(binary)],check=True,capture_output=True)
|
||||
result=np.fromstring(subprocess.check_output([str(binary)],text=True),sep=' ').reshape(9,-1)
|
||||
expected,_=reconstruct(c.astype(float),p,neighbors,offsets)
|
||||
np.testing.assert_allclose(result,expected,atol=6e-8,rtol=2e-7)
|
||||
@@ -1,145 +0,0 @@
|
||||
"""Explicit tiny CUDA explosion parity and constructor/one-interval smoke check.
|
||||
|
||||
No installs or device selection defaults. Run only on the authorized GPU host.
|
||||
This is operator/runtime evidence, not Taylor-Green accuracy qualification.
|
||||
"""
|
||||
import argparse
|
||||
import hashlib
|
||||
import json
|
||||
import os
|
||||
from pathlib import Path
|
||||
import sys
|
||||
|
||||
import numpy as np
|
||||
|
||||
|
||||
def check_case(ctx, shifted, projected):
|
||||
import pycuda.driver as cuda
|
||||
from CelerisLab.config import LBMConfig
|
||||
from CelerisLab.lbm.refinement_stepper import FixedPatchStepper
|
||||
from CelerisLab.lbm.refinement_tables import projected_explosion_tables
|
||||
from CelerisLab.lbm.refinement import ACTIVE
|
||||
from test_projected_explosion import reconstruct, W
|
||||
|
||||
cfg = LBMConfig(nx=16, ny=16, viscosity=.1, velocity=0,
|
||||
ddf_shifting=shifted)
|
||||
cfg.validate()
|
||||
options = {"explosion": "projected_linear"} if projected else {}
|
||||
# Omitting explosion in the constant case tests the production default.
|
||||
with FixedPatchStepper(cfg, context=ctx, refinements=[[(4, 4, 12, 12)]],
|
||||
level_blocks=[(4, 4), (8, 4)], **options) as run:
|
||||
parent, child = run._levels
|
||||
pair = run._pairs[0]
|
||||
patch = run.hierarchy.pairs[0]
|
||||
coarse_cells = int(np.prod(parent.layout.local_shape))
|
||||
fine_cells = int(np.prod(child.layout.local_shape))
|
||||
assert coarse_cells != fine_cells
|
||||
assert pair.parent_cells == coarse_cells
|
||||
assert len(pair.interpolation) == (2 if projected else 0)
|
||||
donor = patch.ghost_coarse.astype(np.intp)
|
||||
# Random variation must exercise the gradient, not just a constant field.
|
||||
c = np.random.default_rng(11).normal(0, .001, (9, 16, 16))
|
||||
if not shifted:
|
||||
c += W[:, None, None]
|
||||
c = c.astype(np.float32)
|
||||
legal = np.zeros(256, bool)
|
||||
legal[donor] = True
|
||||
c.reshape(9, -1)[:, ~legal] = np.nan
|
||||
coarse = np.full(np.prod(parent.layout.blocked_shape), np.nan, np.float32)
|
||||
for q in range(9):
|
||||
coarse[parent.layout.slot(parent.layout.owner.ravel()[legal], q)] = c.reshape(9, -1)[q, legal]
|
||||
fine = np.full(np.prod(child.layout.blocked_shape), np.nan, np.float32)
|
||||
cuda.memcpy_htod(parent.current, coarse)
|
||||
cuda.memcpy_htod(child.current, fine)
|
||||
calls = []
|
||||
real_hop = run._hop
|
||||
try:
|
||||
# Execute the production explosion launch exactly; isolate it from
|
||||
# subsequent streaming/collision without replacing the kernel/tables.
|
||||
run._hop = lambda *args, **kwargs: calls.append(args)
|
||||
run._advance(1, parent.current, block=run._block, stream=run._stream)
|
||||
run._stream.synchronize()
|
||||
finally:
|
||||
run._hop = real_hop
|
||||
assert calls == [(1, child.current, child.spare), (1, child.spare, child.current)]
|
||||
cuda.memcpy_dtoh(fine, child.current)
|
||||
targets = child.layout.owner.ravel()[patch.ghost_fine]
|
||||
slots = np.array([child.layout.slot(targets, q) for q in range(9)])
|
||||
actual = fine[slots]
|
||||
neighbors, offsets = projected_explosion_tables(patch, parent.layout)
|
||||
inverse = np.full(parent.layout.nblocks * coarse_cells, -1, dtype=int)
|
||||
inverse[parent.layout.owner.ravel()] = np.arange(256)
|
||||
constant = c.reshape(9, -1)[:, donor].astype(float)
|
||||
expected = reconstruct(c.astype(float), patch, inverse[neighbors], offsets)[0] if projected else constant
|
||||
assert np.isfinite(actual).all()
|
||||
if projected:
|
||||
assert np.max(np.abs(expected - constant)) > 1e-5
|
||||
np.testing.assert_allclose(actual, expected, atol=6e-8, rtol=2e-7)
|
||||
untouched = np.ones(fine.size, bool)
|
||||
untouched[slots.ravel()] = False
|
||||
assert np.isnan(fine[untouched]).all(), "explosion wrote outside target slots"
|
||||
error = float(np.max(np.abs(actual - expected)))
|
||||
|
||||
# Restore ordinary execution and exercise real constructor wiring,
|
||||
# stream-only ghost hops, restriction, halo copies and collision once.
|
||||
initial = [np.broadcast_to(W[:, None, None], (9, *k.shape)).copy()
|
||||
for k in run.hierarchy.kinds]
|
||||
run.initialize(*initial)
|
||||
run.step(1)
|
||||
for values, kind in zip(run.download(), run.hierarchy.kinds):
|
||||
active = values[:, kind == ACTIVE]
|
||||
assert np.isfinite(active).all()
|
||||
np.testing.assert_allclose(active, np.broadcast_to(W[:, None], active.shape),
|
||||
atol=3e-7, rtol=1e-6)
|
||||
assert run.step_count == 1
|
||||
return dict(shifted=shifted, explosion="projected_linear" if projected else "constant_default",
|
||||
parent_stride=coarse_cells, child_stride=fine_cells,
|
||||
compared_slots=int(actual.size), max_abs_error=error,
|
||||
poisoned_nondonors=True, untouched_slots_preserved=True, equilibrium_step=True)
|
||||
|
||||
|
||||
def main():
|
||||
parser = argparse.ArgumentParser(description=__doc__)
|
||||
parser.add_argument("--repo", type=Path, required=True)
|
||||
parser.add_argument("--output", type=Path, required=True)
|
||||
parser.add_argument("--run-gpu", action="store_true", help="Explicitly opt into GPU execution")
|
||||
args = parser.parse_args()
|
||||
selected = os.environ.get("CUDA_VISIBLE_DEVICES", "")
|
||||
if not args.run_gpu or not selected or "," in selected or selected == "-1":
|
||||
parser.error("--run-gpu and exactly one explicit physical CUDA_VISIBLE_DEVICES are required")
|
||||
if args.output.exists():
|
||||
parser.error("output already exists; choose a new receipt path")
|
||||
root = args.repo.resolve()
|
||||
sys.path[:0] = [str(root / "src"), str(root / "tests/unit"),
|
||||
str(root / "tests/validation/taylor_green")]
|
||||
import CelerisLab
|
||||
if Path(CelerisLab.__file__).resolve() != root / "src/CelerisLab/__init__.py":
|
||||
raise RuntimeError("Wrong imported source checkout")
|
||||
from run_case import provenance
|
||||
report = dict(source=provenance(root),
|
||||
numpy_oracle_sha256=hashlib.sha256((root / "tests/unit/test_projected_explosion.py").read_bytes()).hexdigest(),
|
||||
cuda_visible_devices=selected,
|
||||
logical_device=0, completed=False, cases=[])
|
||||
args.output.parent.mkdir(parents=True, exist_ok=True)
|
||||
def save():
|
||||
args.output.write_text(json.dumps(report, indent=2, allow_nan=False) + "\n")
|
||||
save()
|
||||
try:
|
||||
from CelerisLab.cuda.context import CudaContext
|
||||
with CudaContext(0) as ctx:
|
||||
report["device"] = ctx.device.name()
|
||||
for shifted in (False, True):
|
||||
for projected in (False, True):
|
||||
report["cases"].append(check_case(ctx, shifted, projected))
|
||||
save()
|
||||
report["completed"] = True
|
||||
save()
|
||||
except Exception as exc:
|
||||
report["error"] = f"{type(exc).__name__}: {exc}"
|
||||
save()
|
||||
raise
|
||||
print(json.dumps(report, indent=2))
|
||||
|
||||
|
||||
if __name__ == "__main__":
|
||||
main()
|
||||
@@ -1,101 +0,0 @@
|
||||
{
|
||||
"schema": 1,
|
||||
"implementation_revision": "43c527b",
|
||||
"historical_baseline_revision": "9805383f9c50d867e8555471baf5dbda8333a652",
|
||||
"scope": "Re100 depth2; FP64 CPU arrival_f macro diagnostics, not candidate CUDA execution or performance",
|
||||
"tstar": 0.48,
|
||||
"cases": [
|
||||
{
|
||||
"n": 32,
|
||||
"historical_gpu_report": "CelerisLab_9805383_tg_matched_re100_n32_d2.json",
|
||||
"historical_gpu_sha256": "6e84837781f2c4eb001721d6f828ea0d927b255fd4c46efdef443a9ae59af730",
|
||||
"constant_max_abs_cpu_gpu_metric_difference": {
|
||||
"velocity_l2": 6.928351422436085e-08,
|
||||
"pressure_l2": 3.5717157327030957e-06,
|
||||
"energy_relative": 2.1743219684455806e-07
|
||||
},
|
||||
"runs": [
|
||||
{
|
||||
"explosion": "constant",
|
||||
"final": {
|
||||
"velocity_l2": 0.03249421441793122,
|
||||
"pressure_l2": 0.08986961517973119,
|
||||
"energy_relative": 0.044970292392050686,
|
||||
"amplitude_bias": -0.02307193176461997,
|
||||
"orthogonal_residual_l2": 0.022881432107435998,
|
||||
"mass_signed_relative": -7.616129948928574e-14,
|
||||
"momentum_change": [
|
||||
-3.26405569239796e-14,
|
||||
-2.7000103541841014e-14
|
||||
]
|
||||
},
|
||||
"max_abs_mass_relative": 7.616129948928574e-14,
|
||||
"max_abs_momentum_change": 3.608224830031759e-14
|
||||
},
|
||||
{
|
||||
"explosion": "projected_linear",
|
||||
"final": {
|
||||
"velocity_l2": 0.015226371368103809,
|
||||
"pressure_l2": 0.048560123195715434,
|
||||
"energy_relative": 0.02285059695090361,
|
||||
"amplitude_bias": -0.011601431258836059,
|
||||
"orthogonal_residual_l2": 0.009861499773660909,
|
||||
"mass_signed_relative": -7.616129948928574e-14,
|
||||
"momentum_change": [
|
||||
-4.030109579389318e-14,
|
||||
-2.3444787777826548e-15
|
||||
]
|
||||
},
|
||||
"max_abs_mass_relative": 7.616129948928574e-14,
|
||||
"max_abs_momentum_change": 4.030109579389318e-14
|
||||
}
|
||||
]
|
||||
},
|
||||
{
|
||||
"n": 64,
|
||||
"historical_gpu_report": "CelerisLab_9805383_tg_re100_n64_d2.json",
|
||||
"historical_gpu_sha256": "251f743d6adc33dff1d829db91fcc5f982c9ac299c177eb2c94e313249b25b9f",
|
||||
"constant_max_abs_cpu_gpu_metric_difference": {
|
||||
"velocity_l2": 1.7330029265794078e-08,
|
||||
"pressure_l2": 8.634212284933107e-07,
|
||||
"energy_relative": 8.74280938097105e-08
|
||||
},
|
||||
"runs": [
|
||||
{
|
||||
"explosion": "constant",
|
||||
"final": {
|
||||
"velocity_l2": 0.01131134574353476,
|
||||
"pressure_l2": 0.03550495463085949,
|
||||
"energy_relative": 0.012514764591008386,
|
||||
"amplitude_bias": -0.006336459299048802,
|
||||
"orthogonal_residual_l2": 0.009369942693596348,
|
||||
"mass_signed_relative": -1.412203687323199e-13,
|
||||
"momentum_change": [
|
||||
-2.1049828546892968e-13,
|
||||
-1.632548263241773e-14
|
||||
]
|
||||
},
|
||||
"max_abs_mass_relative": 1.412203687323199e-13,
|
||||
"max_abs_momentum_change": 2.1049828546892968e-13
|
||||
},
|
||||
{
|
||||
"explosion": "projected_linear",
|
||||
"final": {
|
||||
"velocity_l2": 0.004930396085095945,
|
||||
"pressure_l2": 0.016580125701009935,
|
||||
"energy_relative": 0.0056291365148441195,
|
||||
"amplitude_bias": -0.0028419317091766816,
|
||||
"orthogonal_residual_l2": 0.004028924138812507,
|
||||
"mass_signed_relative": -1.4099832412739488e-13,
|
||||
"momentum_change": [
|
||||
-1.709743457922741e-13,
|
||||
7.568945470382005e-14
|
||||
]
|
||||
},
|
||||
"max_abs_mass_relative": 1.4099832412739488e-13,
|
||||
"max_abs_momentum_change": 1.709743457922741e-13
|
||||
}
|
||||
]
|
||||
}
|
||||
]
|
||||
}
|
||||
@@ -1,4 +1,4 @@
|
||||
"""One bounded GPU case, with explicit opt-in experimental explosion."""
|
||||
"""One bounded GPU case. No production edits, plots, checkpoints or field dumps."""
|
||||
|
||||
import argparse
|
||||
import hashlib
|
||||
@@ -75,10 +75,7 @@ def main():
|
||||
p.add_argument("--n", type=int, choices=[32, 64, 128, 256], required=True)
|
||||
p.add_argument("--depth", type=int, choices=[1, 2, 3], required=True)
|
||||
p.add_argument("--output", type=Path, required=True)
|
||||
p.add_argument("--explosion", choices=["constant", "projected_linear"], default="constant")
|
||||
args = p.parse_args()
|
||||
if args.explosion != "constant" and args.depth != 2:
|
||||
p.error("projected_linear requires depth 2")
|
||||
if not os.environ.get("CUDA_VISIBLE_DEVICES"):
|
||||
p.error("Explicit physical CUDA_VISIBLE_DEVICES selection required")
|
||||
repo = args.repo.resolve()
|
||||
@@ -102,8 +99,6 @@ def main():
|
||||
report = dict(
|
||||
schema=1,
|
||||
source=provenance(repo),
|
||||
historical_baseline_revision="9805383f9c50d867e8555471baf5dbda8333a652",
|
||||
explosion=args.explosion,
|
||||
n=args.n,
|
||||
re_L=args.re,
|
||||
depth=args.depth,
|
||||
@@ -137,7 +132,6 @@ def main():
|
||||
coarse_boundary="periodic",
|
||||
refinements=refinements,
|
||||
level_blocks=[(8, 8)] * args.depth,
|
||||
explosion=args.explosion,
|
||||
)
|
||||
with run:
|
||||
run.initialize(
|
||||
|
||||
@@ -1,85 +0,0 @@
|
||||
"""Diagnostic-only rectangular adapter to CPUREF-0.3. No production changes."""
|
||||
import sys,json,time,argparse,hashlib
|
||||
from pathlib import Path
|
||||
import numpy as np
|
||||
parser=argparse.ArgumentParser(description=__doc__)
|
||||
parser.add_argument('--repo',type=Path,required=True,help='Candidate checkout at 43c527b')
|
||||
parser.add_argument('--n',type=int,choices=(32,64),default=32)
|
||||
parser.add_argument('--output-dir',type=Path,required=True)
|
||||
args=parser.parse_args()
|
||||
ROOT=args.repo.resolve()
|
||||
sys.path[:0]=[str(ROOT/'src'),str(ROOT/'tests/validation/multigrid'),str(ROOT/'tests/validation/taylor_green'),str(ROOT/'tests/unit')]
|
||||
import cpu_reference as cpu
|
||||
import oracle
|
||||
from run_case import provenance
|
||||
from test_projected_explosion import reconstruct
|
||||
from CelerisLab.config import LBMConfig
|
||||
from CelerisLab.lbm.refinement import FixedPatchSet2D
|
||||
from CelerisLab.lbm.refinement_tables import projected_explosion_tables
|
||||
from CelerisLab.lbm.blocks import BlockLayout2D
|
||||
class RectSpec(cpu.Spec):
|
||||
@property
|
||||
def n_fine(self): return 2*self.n_coarse
|
||||
|
||||
def setup(n):
|
||||
nu=oracle.U*n/100
|
||||
cfg=LBMConfig(nx=n,ny=n,viscosity=nu)
|
||||
bounds=oracle.rectangles(n,2)[0]
|
||||
p=FixedPatchSet2D.from_config(cfg,bounds)
|
||||
spec=RectSpec(n_coarse=n,patch_lo=n//8,patch_hi=7*n//8,halo=n//4,tau_coarse=p.tau_coarse,tau_fine=p.tau_fine,collision='srt')
|
||||
q,k=np.divmod(p.coalesce_coarse.astype(int),n*n); y,x=np.divmod(k,n)
|
||||
rows=np.column_stack((q,y,x)); links=[]
|
||||
for qi,yi,xi in rows:
|
||||
sx,sy=xi-cpu.CX[qi],yi-cpu.CY[qi]
|
||||
if not p.covered[sy,sx]: links.append(cpu.CornerLink(f'{xi}_{yi}_q{qi}',int(qi),(int(sx),int(sy)),(int(xi),int(yi))))
|
||||
assert len(links)==8
|
||||
maps=cpu.Maps(~p.covered,p.covered,p.fine_kind==0,p.fine_kind==1,p.fine_kind==2,p.fine_kind,np.arange(2*n)//2,(np.arange(2*n)+.5)/2,rows,tuple(links))
|
||||
# Verify the CPU coalescence child locations equal actual production tables.
|
||||
children=np.array([[qi*(2*n)**2+(2*yi+dy)*2*n+2*xi+dx for dy in (0,1) for dx in (0,1)] for qi,yi,xi in rows])
|
||||
np.testing.assert_array_equal(children,p.coalesce_fine)
|
||||
layout=BlockLayout2D.build(n,n,8,8,periodic=(True,True))
|
||||
neighbors,offsets=projected_explosion_tables(p,layout)
|
||||
inverse=np.full(layout.nblocks*np.prod(layout.local_shape),-1,dtype=int)
|
||||
inverse[layout.owner.ravel()]=np.arange(n*n)
|
||||
neighbors=inverse[neighbors]
|
||||
def explode(gc,cv,gf,fv,m,writes):
|
||||
# Only actual transfer footprint, including inner and outer ghost slabs.
|
||||
gy,gx=np.divmod(p.ghost_fine.astype(int),2*n)
|
||||
if mode[0]=='constant': values=gc.reshape(9,-1)[:,p.ghost_coarse]
|
||||
else: values=reconstruct(gc,p,neighbors,offsets)[0]
|
||||
assert np.isfinite(values).all()
|
||||
gf[:,gy,gx]=values; fv[:,gy,gx]=True; writes[gy,gx]+=1
|
||||
mode=['constant']; cpu._explode=explode
|
||||
return spec,maps,p,mode,nu
|
||||
|
||||
def run(n,which):
|
||||
spec,m,p,mode,nu=setup(n); mode[0]=which
|
||||
masks=[m.coarse_active,m.fine_active]
|
||||
arrays=[oracle.initial(mask.shape,l,n,nu) for l,mask in enumerate(masks)]
|
||||
for a,mask in zip(arrays,masks):a[:,~mask]=np.nan
|
||||
s=cpu.State(*arrays); rows=[]; initmass=None; momentum0=None; start=time.monotonic()
|
||||
for tstar in oracle.TIMES:
|
||||
step=round(tstar*n/oracle.U)
|
||||
while s.tick<2*step: s,_=cpu.advance_coarse_once(spec,m,s)
|
||||
arrays=[s.coarse_f,s.fine_f]
|
||||
row=oracle.metrics(arrays,masks,step,n,nu,initmass)
|
||||
if initmass is None:initmass=row['mass']
|
||||
dot=den=res=0.; parts=[]; momentum=np.zeros(2)
|
||||
for l,(a,mask) in enumerate(zip(arrays,masks)):
|
||||
v=a[:,mask];rho=v.sum(0);u=cpu.CX@v/rho;w=cpu.CY@v/rho
|
||||
x,y=oracle.centers(mask.shape,l);ex,ey,_=oracle.exact(x[mask],y[mask],step,n,nu);vol=.25**l
|
||||
dot+=vol*np.sum(u*ex+w*ey);den+=vol*np.sum(ex*ex+ey*ey)
|
||||
parts.append((u,w,ex,ey,vol));momentum+=vol*np.array([np.sum(cpu.CX@v),np.sum(cpu.CY@v)])
|
||||
amp=dot/den
|
||||
res=sum(vol*np.sum((u-amp*ex)**2+(w-amp*ey)**2) for u,w,ex,ey,vol in parts)
|
||||
if momentum0 is None:momentum0=momentum.copy()
|
||||
row.update(step=step,exact_energy_quadrature_factor=den/(2*n*n*row['exact_energy']),amplitude_ratio=amp,amplitude_bias=amp-1,orthogonal_residual_l2=float(np.sqrt(res/den)),energy_signed_relative=row['energy']/row['exact_energy']-1,mass_signed_relative=row['mass']/initmass-1,momentum=momentum.tolist(),momentum_change=(momentum-momentum0).tolist())
|
||||
rows.append(row)
|
||||
return dict(n=n,explosion=which,seconds=time.monotonic()-start,rows=rows)
|
||||
if __name__=='__main__':
|
||||
a=args
|
||||
a.output_dir.mkdir(parents=True,exist_ok=True)
|
||||
result=dict(implementation_revision='43c527b',source=provenance(ROOT),diagnostic_input_sha256={name:hashlib.sha256((ROOT/name).read_bytes()).hexdigest() for name in ('tests/validation/multigrid/cpu_reference.py','tests/unit/test_projected_explosion.py')},precision='FP64 physical populations',phase='arrival_f; macro moments invariant under collision, initialization equilibrium',runs=[])
|
||||
out=a.output_dir/f'n{a.n}_ab.json'
|
||||
for mode in ('constant','projected_linear'):
|
||||
r=run(a.n,mode);result['runs'].append(r);out.write_text(json.dumps(result,indent=2)+'\n');print(json.dumps(r),flush=True)
|
||||
@@ -0,0 +1,12 @@
|
||||
unittest.case.FunctionTestCase (test_bounded_state_evidence) ... ok
|
||||
unittest.case.FunctionTestCase (test_disjoint_complete_categories) ... ok
|
||||
unittest.case.FunctionTestCase (test_exact_config_and_source) ... ok
|
||||
unittest.case.FunctionTestCase (test_inactive_nonfinite_does_not_fail) ... ok
|
||||
unittest.case.FunctionTestCase (test_original_safety_limits) ... ok
|
||||
unittest.case.FunctionTestCase (test_population_macro_force_separate) ... ok
|
||||
unittest.case.FunctionTestCase (test_source_guard_and_deadline) ... ok
|
||||
|
||||
----------------------------------------------------------------------
|
||||
Ran 7 tests in 0.039s
|
||||
|
||||
OK
|
||||
@@ -0,0 +1,219 @@
|
||||
"""Read-only observations of the exact failed SRT control, at most 320 steps.
|
||||
|
||||
Default is CPU preflight. Execution requires root admission and an external watchdog.
|
||||
No solver, initialization, geometry or numerical parameter modifications.
|
||||
"""
|
||||
import argparse
|
||||
import hashlib
|
||||
import importlib
|
||||
import json
|
||||
import math
|
||||
import os
|
||||
from pathlib import Path
|
||||
import sys
|
||||
import time
|
||||
from tempfile import TemporaryDirectory
|
||||
|
||||
import numpy as np
|
||||
|
||||
HERE=Path(__file__).resolve().parent
|
||||
DEFAULT_SOURCE=HERE.parents[2]
|
||||
LIMIT_BYTES=128*1024**2
|
||||
|
||||
|
||||
def dump(path,value):
|
||||
path.write_text(json.dumps(value,indent=2,allow_nan=False))
|
||||
|
||||
|
||||
def number(value):
|
||||
value=float(value)
|
||||
return value if math.isfinite(value) else ('NaN' if math.isnan(value) else ('+Inf' if value>0 else '-Inf'))
|
||||
|
||||
|
||||
def source_config(source):
|
||||
manifest=json.loads((HERE/'source_manifest.json').read_text())
|
||||
for name,digest in manifest['sha256'].items():
|
||||
if hashlib.sha256((source/name).read_bytes()).hexdigest()!=digest:
|
||||
raise ValueError('Pinned source mismatch: '+name)
|
||||
sys.path.insert(0,str(source/'src')); sys.path.insert(0,str(source/'tests/validation'))
|
||||
import CelerisLab
|
||||
if Path(CelerisLab.__file__).resolve()!=source/'src/CelerisLab/__init__.py':
|
||||
raise ValueError('Wrong CelerisLab import')
|
||||
runner=importlib.import_module('run_refined_dfg')
|
||||
if Path(runner.__file__).resolve()!=source/'tests/validation/run_refined_dfg.py':
|
||||
raise ValueError('Wrong runner import')
|
||||
h,_=runner.helpers(source)
|
||||
cfg,body,p=runner.config(h,80) # Exact original config factory, not a reimplementation.
|
||||
return cfg,body,p,manifest
|
||||
|
||||
|
||||
def categories(flags,p):
|
||||
"""Disjoint physical categories; subtype nibble is not a bitfield."""
|
||||
from CelerisLab.lbm.descriptors import FLUID,SOLID,OBSTACLE
|
||||
y,x=np.indices(flags.shape); fluid=(flags&FLUID)!=0
|
||||
masks={}; left=fluid.copy()
|
||||
for name,test in (
|
||||
('body_near',(x-p['center'][0])**2+(y-p['center'][1])**2 <= (p['radius']+3)**2),
|
||||
('outlet_near',x>=flags.shape[1]-4),('inlet_near',x<=3),
|
||||
('wall_near',(y<=3)|(y>=flags.shape[0]-4))):
|
||||
masks[name]=left&test; left &= ~test
|
||||
masks['bulk']=left
|
||||
subtype=flags&0xf0
|
||||
masks['inlet_ghost']=(~fluid)&(subtype==0x20)
|
||||
masks['outlet_ghost']=(~fluid)&(subtype==0x30)
|
||||
masks['wall_ghost']=(~fluid)&(subtype==0x10)
|
||||
assigned=np.logical_or.reduce(list(masks.values()))
|
||||
masks['body_solid']=(~assigned)&(((flags&OBSTACLE)!=0)|((flags&SOLID)!=0))
|
||||
assigned|=masks['body_solid']; masks['other_inactive']=~assigned
|
||||
return fluid,masks
|
||||
|
||||
|
||||
def finite_extrema(a,mask):
|
||||
good=mask&np.isfinite(a)
|
||||
if not good.any(): return dict(min=None,max=None)
|
||||
idx=np.flatnonzero(good); values=a.ravel()[idx]
|
||||
lo=int(idx[np.argmin(values)]); hi=int(idx[np.argmax(values)])
|
||||
return dict(min=float(a.ravel()[lo]),max=float(a.ravel()[hi]),
|
||||
min_yx=list(map(int,np.unravel_index(lo,a.shape))),
|
||||
max_yx=list(map(int,np.unravel_index(hi,a.shape))))
|
||||
|
||||
|
||||
def diagnose(g,macro,force,flags,p,step):
|
||||
fluid,masks=categories(flags,p)
|
||||
badpop=~np.isfinite(g); badnode=badpop.any(axis=0)
|
||||
badmacro=np.logical_or.reduce([~np.isfinite(macro[k]) for k in ('rho','ux','uy')])
|
||||
with np.errstate(over='ignore',invalid='ignore'):
|
||||
mach=np.sqrt(3*(np.asarray(macro['ux'],np.float64)**2+np.asarray(macro['uy'],np.float64)**2))
|
||||
rho=macro['rho']
|
||||
# Exactly the original physical macro/reaction conditions, now sampled each step.
|
||||
nonfinite_macro=bool(np.any(badmacro&fluid))
|
||||
force_bad=force is not None and not np.isfinite(force).all()
|
||||
density_bad=bool(np.any(fluid&((rho<.5)|(rho>1.5))))
|
||||
mach_bad=bool(np.any(fluid&(mach>.2)))
|
||||
population_bad=bool(np.any(badnode&fluid))
|
||||
original_failure=nonfinite_macro or force_bad or density_bad or mach_bad
|
||||
offending=fluid&(badnode|badmacro|(rho<.5)|(rho>1.5)|(mach>.2))
|
||||
examples=[]
|
||||
for y,x in np.argwhere(offending)[:16]:
|
||||
examples.append(dict(y=int(y),x=int(x),physical_xy_m=[float(x*p['dx']),float((y-.5)*p['dx'])],
|
||||
category=next(name for name,mask in masks.items() if mask[y,x]),flag=int(flags[y,x]),
|
||||
nonfinite_q=np.flatnonzero(badpop[:,y,x]).tolist(),
|
||||
populations=[number(v) for v in g[:,y,x]],
|
||||
rho=number(rho[y,x]),ux=number(macro['ux'][y,x]),uy=number(macro['uy'][y,x])))
|
||||
neighborhoods=[]
|
||||
for node in examples[:4]:
|
||||
y,x=node['y'],node['x']; y0,y1=max(0,y-2),min(flags.shape[0],y+3); x0,x1=max(0,x-2),min(flags.shape[1],x+3)
|
||||
neighborhoods.append(dict(bounds_xy=[x0,y0,x1,y1],flags=flags[y0:y1,x0:x1].tolist(),
|
||||
physical_populations=[[[number(v) for v in row] for row in plane] for plane in g[:,y0:y1,x0:x1]]))
|
||||
return dict(step=step,tstar=step*p['mean_speed']/p['diameter'],
|
||||
physical_failure=bool(original_failure or population_bad),
|
||||
original_health_failure=bool(original_failure),
|
||||
physical_population_nonfinite=population_bad,physical_macro_nonfinite=nonfinite_macro,
|
||||
force_nonfinite=bool(force_bad),density_limit=density_bad,mach_limit=mach_bad,
|
||||
force=None if force is None else [number(v) for v in force],
|
||||
categories={name:dict(nodes=int(mask.sum()),nonfinite_population_nodes=int((mask&badnode).sum()),
|
||||
nonfinite_populations=int(badpop[:,mask].sum()),nonfinite_macro_nodes=int((mask&badmacro).sum()))
|
||||
for name,mask in masks.items()},
|
||||
rho=finite_extrema(rho,fluid),mach=finite_extrema(mach,fluid),
|
||||
first_physical_examples=examples,local_neighborhoods=neighborhoods)
|
||||
|
||||
|
||||
def snapshot(sim,p):
|
||||
# Public physical decode and original production macro path. No host reconstruction
|
||||
# substitutes for the original health check. get_ddf shares its completed-step cache.
|
||||
with np.errstate(all='ignore'):
|
||||
macro={k:np.asarray(v).copy() for k,v in sim.get_macroscopic().items()}
|
||||
g=sim.get_ddf().reshape(9,p['ny'],p['nx'])
|
||||
import pycuda.driver as cuda
|
||||
raw=np.empty_like(g,dtype=np.float32)
|
||||
with sim.ctx.activate():
|
||||
cuda.memcpy_dtoh(raw,sim.field.ddf_gpu)
|
||||
return dict(raw=raw,g=g,macro=macro,step=int(sim.stepper.step_count))
|
||||
|
||||
|
||||
def save_states(dest,previous,current,flags,diagnostic):
|
||||
"""Two states only; raw shifted bits and decoded observations, no trajectory."""
|
||||
arrays={'flags':flags}
|
||||
for name,state in (('previous',previous),('current',current)):
|
||||
if state is None: continue
|
||||
arrays[name+'_raw_shifted']=state['raw']
|
||||
arrays[name+'_physical']=state['g']
|
||||
arrays[name+'_step']=np.array(state['step'],np.int64)
|
||||
# At D80, raw+physical for two states ~84 MiB; reserve >4 MiB for JSON/NPZ overhead.
|
||||
if sum(v.nbytes for v in arrays.values())>LIMIT_BYTES-4*1024**2:
|
||||
raise ValueError('Evidence arrays exceed bounded artifact budget')
|
||||
np.savez(dest/'states.npz',**arrays)
|
||||
dump(dest/'diagnostics.json',diagnostic)
|
||||
size=sum(p.stat().st_size for p in dest.iterdir() if p.is_file())
|
||||
if size>LIMIT_BYTES: raise RuntimeError('Evidence directory exceeds 128 MiB')
|
||||
return size
|
||||
|
||||
|
||||
def deadline_check(deadline):
|
||||
if time.monotonic()>=deadline: raise TimeoutError('Diagnostic wall ceiling reached')
|
||||
|
||||
|
||||
def execute(a,cfg,body,p):
|
||||
from CelerisLab.simulation import Simulation
|
||||
started=time.monotonic(); deadline=started+a.wall_seconds
|
||||
previous=None; prior_report=None; initial_report=None
|
||||
with TemporaryDirectory() as temp:
|
||||
temp=Path(temp); dump(temp/'lbm.json',cfg); dump(temp/'body.json',body)
|
||||
with Simulation(str(temp/'lbm.json'),str(temp/'body.json'),device_id=0) as sim:
|
||||
sim.initialize() # Exact original production initialization, unchanged.
|
||||
flags=sim.get_flags().reshape(p['ny'],p['nx'])
|
||||
current=snapshot(sim,p)
|
||||
initial_report=diagnose(current['g'],current['macro'],None,flags,p,0)
|
||||
report=initial_report; status='initial_physical_failure' if report['physical_failure'] else 'step_cap_reached'
|
||||
try:
|
||||
deadline_check(deadline)
|
||||
if not report['physical_failure']:
|
||||
for _ in range(320):
|
||||
deadline_check(deadline)
|
||||
previous=current; prior_report=report
|
||||
sim.run(1) # Same solver; observation buffers reset/read once per step.
|
||||
force=sim.read_force(0).astype(np.float64)
|
||||
current=snapshot(sim,p)
|
||||
report=diagnose(current['g'],current['macro'],force,flags,p,current['step'])
|
||||
if current['step']==1:
|
||||
print('READY '+json.dumps(dict(step=1,all_observation_paths_exercised=True,
|
||||
physical_healthy=not report['physical_failure']),allow_nan=False),flush=True)
|
||||
if report['physical_failure']:
|
||||
status='first_physical_failure'; break
|
||||
deadline_check(deadline)
|
||||
except TimeoutError:
|
||||
status='wall_time_limit'
|
||||
details=dict(status=status,executed_steps=int(sim.stepper.step_count),
|
||||
observation_step=current['step'],previous_observation_step=None if previous is None else previous['step'],
|
||||
initial=initial_report,preceding=prior_report,current=report,
|
||||
wall_seconds=time.monotonic()-started,
|
||||
storage='raw_shifted FP32 is exact active-buffer data; physical is production FP32 decoded G. Both are diagnostic snapshots, not complete restart checkpoints.',
|
||||
health_scope='Physical FLUID nodes and force only; ghost/body categories cannot independently trigger physical failure.',
|
||||
interpretation='Near-region labels locate symptoms, not the root cause. Per-step inspection changes observation cadence only. No physical acceptance.')
|
||||
size=save_states(a.output,previous,current,flags,details)
|
||||
print(json.dumps(dict(status=status,executed_steps=int(sim.stepper.step_count),evidence_bytes=size),allow_nan=False),flush=True)
|
||||
return 0 if status=='step_cap_reached' else 2
|
||||
|
||||
|
||||
def main():
|
||||
parser=argparse.ArgumentParser(description=__doc__)
|
||||
parser.add_argument('--source',type=Path,default=DEFAULT_SOURCE)
|
||||
parser.add_argument('--output',type=Path,required=True)
|
||||
parser.add_argument('--execute',action='store_true')
|
||||
parser.add_argument('--gpu-admitted',action='store_true')
|
||||
parser.add_argument('--wall-seconds',type=float)
|
||||
a=parser.parse_args(); a.source=a.source.resolve()
|
||||
cfg,body,p,manifest=source_config(a.source)
|
||||
if a.output.exists() and any(a.output.iterdir()): raise ValueError('Use a new/empty output directory')
|
||||
if a.execute and (not a.gpu_admitted or not os.environ.get('CUDA_VISIBLE_DEVICES') or
|
||||
a.wall_seconds is None or not math.isfinite(a.wall_seconds) or a.wall_seconds<=0):
|
||||
raise ValueError('Explicit root admission, device selection and finite wall ceiling required')
|
||||
a.output.mkdir(parents=True,exist_ok=True)
|
||||
dump(a.output/'preflight.json',dict(source=manifest,config=cfg,body=body,parameters=p,
|
||||
diagnostic_sha256=hashlib.sha256(Path(__file__).read_bytes()).hexdigest(),max_steps=320,
|
||||
max_evidence_bytes=LIMIT_BYTES,executed=False))
|
||||
if not a.execute: return 0
|
||||
return execute(a,cfg,body,p)
|
||||
|
||||
|
||||
if __name__=='__main__': raise SystemExit(main())
|
||||
@@ -0,0 +1,112 @@
|
||||
{
|
||||
"commit": "9805383f9c50d867e8555471baf5dbda8333a652",
|
||||
"failure_source_receipt_sha256": "a77f71550c52d4b8b6e946a3cb98fc5de5db3da1bcbbb3457c6d60167677ce4e",
|
||||
"sha256": {
|
||||
"src/CelerisLab/__init__.py": "21cc469bd6e970a1f9ff5970c8eea4602065e41fc881854759ee565ee55c10c6",
|
||||
"src/CelerisLab/body/__init__.py": "e4e0e8f0769a94428d5b02fac790443997556cfc5515a5f1ed1595d2c694d69d",
|
||||
"src/CelerisLab/body/action_smoother.py": "b1a23ee6bbd4850b172cb8738c5c3546ee465a54189e6af9d8044f023d4687dc",
|
||||
"src/CelerisLab/body/coupling/__init__.py": "c931f7eb318d48408c3e2febcc6917c88c8dcc1697cbf4329b1f340d94c35763",
|
||||
"src/CelerisLab/body/coupling/soa_packer.py": "8ec26fd55ef74801bbd5ab6bd3d0a7dabc750cbd498aaac2ca4c61a0108ad3c9",
|
||||
"src/CelerisLab/body/ddf_patch.py": "60fcfb7441e73bf290bcff41ca3a83da3e7ddad765d7247464e8f02e3043b4e2",
|
||||
"src/CelerisLab/body/geometry/__init__.py": "ada88980ab672959aca9aa3a4c4aade3219524b2ab68110cd2a2f41e3e0ca90a",
|
||||
"src/CelerisLab/body/geometry/base.py": "cceca14361ca2f34d34a3e43730e1a79b8ca81be00f0dd62e884db32b479419f",
|
||||
"src/CelerisLab/body/geometry/circle.py": "7605ca7c21103f1d801ac73ab8dd18dffbdac425b2dee7b8858b283628a9e436",
|
||||
"src/CelerisLab/body/jets.py": "4104c24af4651f4bb4f8d8fd36fb6d88f41c6e4469822f36e22e74c9ede31dac",
|
||||
"src/CelerisLab/body/manager.py": "01b653d25bd9b4333379c8bfd12383596b686d2029f2e91b1c91b618540ec6b3",
|
||||
"src/CelerisLab/body/objects.py": "8e63cee8faa9cc6243bcff428be628dfad73a02a9a3b8ece7d78c0a63406a08d",
|
||||
"src/CelerisLab/body/preprocess/__init__.py": "dfd9d58bc07f626ab23a70053e31b88a6d9165d2e4c76a4e9f48abe674d3d2ec",
|
||||
"src/CelerisLab/body/preprocess/flag_overlay.py": "831fc9e9736b758847759a085ff133eb49ec91318ace4fda76f85960138ee300",
|
||||
"src/CelerisLab/body/registry.py": "fbb7327780adbdc6da15ebdb799980daf32df22ee974af0893d7409f177bbb68",
|
||||
"src/CelerisLab/body/sync_plan.py": "3a15bfe9ebeb91482dbfc68850761ef39c872cc12d2efc795babd0c01e392323",
|
||||
"src/CelerisLab/common/__init__.py": "d4dbde78bc97fccc9eabac9abae8f0f15c112c10ff8e9b45bd9401d4723df1ef",
|
||||
"src/CelerisLab/common/_types.py": "aad2ff1a9033d4fd68783ad7123afb47201ddc58785cb6dc0246947037072a5f",
|
||||
"src/CelerisLab/common/checkpoint.py": "b2f960aecd5ac27a3a7130b809ffad4709c44d522edef0359ab952654625410b",
|
||||
"src/CelerisLab/common/pathline.py": "a1b6efcc0a076d0f1dc8d49a595779426d7d5626b00072a59bac710ff02ad046",
|
||||
"src/CelerisLab/common/preprocess.py": "7fc78a08857cf8e98519500b094a1d896af189b6b15658ff9b388ed51bed4515",
|
||||
"src/CelerisLab/common/render.py": "0e055476257eb2bcd11e733766e52195de02f8fad228f570a3511a7c831bdc29",
|
||||
"src/CelerisLab/common/streakline/__init__.py": "13ff1cfa416fdd721a08a659e76b5a5a99b8d3201add10a83b7b0bc654bc1eec",
|
||||
"src/CelerisLab/common/streakline/_config.py": "a9185ef68e9c7b5d5a1dc0b04a28341e2ad91d13c145a7c106636a878cf0a605",
|
||||
"src/CelerisLab/common/streakline/_integrate.py": "3fbd4368b2c8d0e7fda40dc65aac5df02b085008b4c68acd83cb7ae45d33a13b",
|
||||
"src/CelerisLab/common/streakline/_render.py": "236cd637414ee318c4d66f9aed32110d8dc42a100d65fde06172f7cd0ba62c65",
|
||||
"src/CelerisLab/common/streakline/_streakline.py": "1a3e08daa706b5f83cdeb337e9a945a36ddf7583c40af1d0bb9d825ac954df37",
|
||||
"src/CelerisLab/config.py": "2f1bba7515f5bc08cb3a8d140bcafe7fa0689e01b3b06494697bb2956a71530e",
|
||||
"src/CelerisLab/configs/CONFIG.md": "41cafdbe525366c08aa9d0416ea026ccf0026ba7123b8a9b65f968a80d928e3a",
|
||||
"src/CelerisLab/configs/config_body.json": "055f261f0828ca1d4f2bb694bd15b72bbcabe31d552326208f28e37f761adab1",
|
||||
"src/CelerisLab/configs/config_lbm.json": "17e4311f1f250c6ece59177a8b6ff856b69a016c7c10267e774b030a0a390865",
|
||||
"src/CelerisLab/configs/config_lbm_flume_mrt_zouhe.json": "8f593321db05a563a42931603a228d61cbcba06dfbe113262d5cd0ad93c0fe79",
|
||||
"src/CelerisLab/configs/config_lbm_flume_trt_regularized.json": "f4bba8e6a4339fc3c4eb14f6e2f57c4b22993c73703c773d853edfbe34736e56",
|
||||
"src/CelerisLab/configs/config_lbm_three_cylinder_triangle.json": "eeb8e7149dbe4aa6b3a9562802735aa950750dfbe2d972a0727e788573afa817",
|
||||
"src/CelerisLab/cuda/__init__.py": "0d01dff9f0399c8baba822aab5ca0122a135f011008ed8a499ebd9f7e5b06aea",
|
||||
"src/CelerisLab/cuda/compiler_v2.py": "c4cc3ec4445c8d75e6a253dd87963877117a722bc73b9d4811806fc6045d08c1",
|
||||
"src/CelerisLab/cuda/context.py": "013dd4ec6d01d2fbd11afdfb103eac6a273bd9f798d663d761b851eeb27885e9",
|
||||
"src/CelerisLab/cuda/obs_layout.py": "5ffb2c3aeeaaaaeb64f2cd8febfbcf4ad9919e5414020ad753cfade0683b21c2",
|
||||
"src/CelerisLab/lbm/__init__.py": "7f60fb3aaae81501b510d08c2fedff44fcb05657260eb10b6f5cc91e7204306b",
|
||||
"src/CelerisLab/lbm/block_stepper.py": "00b313daddc6e63d8ab8423c9190ca7e92ad291de20a2f6b80eb53e3f2d85ec7",
|
||||
"src/CelerisLab/lbm/blocks.py": "1e644c5719993f418185ad4a10b6950a30636fc912befd9eab41ff48b4cf85cd",
|
||||
"src/CelerisLab/lbm/channel.py": "2d5b5ff43414cb35633ac4ce90ce2c3a3353950b25c168e1c2ab58d498dd8b0f",
|
||||
"src/CelerisLab/lbm/curved_links.py": "b6957fa13d13f864dba4f7364e93a39905d062dbb3ee9b3f5191add81fff0732",
|
||||
"src/CelerisLab/lbm/descriptors.py": "c9f025dfc14da43b989047b84cc22bd05d5cc92c9ec695c1da68fdfb788e3f2b",
|
||||
"src/CelerisLab/lbm/equilibrium.py": "2fb2f2bb7ff326d23abce80fc2a4c0907b17740ea3e29fe6ae079c5044783826",
|
||||
"src/CelerisLab/lbm/field.py": "0e727eacc3706add4d8d15c418e9b631050871f831698d3ac689dd5f2c701b9b",
|
||||
"src/CelerisLab/lbm/hierarchy.py": "f234975074f6b6d289d573ff6ea6832feae0e27cb04f80b37fe81792b13a12e7",
|
||||
"src/CelerisLab/lbm/initializers.py": "dacf9586963e862d6d0a98ef1a066036be6f91e9d423720661d8ef2c1fb2df6a",
|
||||
"src/CelerisLab/lbm/kernels/blocks.cu": "e3b9606f861bfea8c4b0f34e8356bb230081f899c584f67be89178d889099b17",
|
||||
"src/CelerisLab/lbm/kernels/boundary/bounce_back.cuh": "aba3748c564ed91b161d268ef8b737b7c7be96a823063d201f3da684dd845233",
|
||||
"src/CelerisLab/lbm/kernels/boundary/curved_boundary.cuh": "aeb16bfd483514fb03e15a2fed437d673c3b8b2fe68ab83edf4244ef593878ea",
|
||||
"src/CelerisLab/lbm/kernels/boundary/esopull_curved_helpers.cuh": "b9b474bc4edaff05681c5443235472d04072d0d775fc0eb9c5967faef52b0258",
|
||||
"src/CelerisLab/lbm/kernels/boundary/ibm_kernels.cuh": "e6909b547dc8d64cdd8a76a90660243a8f5fee535caa161b52b4dd8b7c29934b",
|
||||
"src/CelerisLab/lbm/kernels/boundary/inlet/channel_stabilized.cuh": "efe077afcbb6b731256a987c2fd79a1dbc470c902f87070d60421ea6cb13d4e2",
|
||||
"src/CelerisLab/lbm/kernels/boundary/inlet/common.cuh": "59b38a89439878e00de7de16b9c7b03feff443fcc5a421593f7d2536dcbb7ab8",
|
||||
"src/CelerisLab/lbm/kernels/boundary/inlet/equilibrium.cuh": "f0964c811b2c41a5aaa1c6d99c490b06e850c634eb8749f1f05ef61f93c2de1d",
|
||||
"src/CelerisLab/lbm/kernels/boundary/inlet/regularized.cuh": "943d4a571818bacb89c70bccfaac202691121e3e385803ce6309123a0a03ddaf",
|
||||
"src/CelerisLab/lbm/kernels/boundary/inlet/zou_he_local.cuh": "e73e66b853b1e4e0e30d8f4185d832aa414ce670a1813ce2b5459f2887f71f89",
|
||||
"src/CelerisLab/lbm/kernels/boundary/inlet_outlet.cuh": "de8b213a6da42c2e5e9f8966199fc66ea4541b85144a90f3f5dbad3c6ab63b97",
|
||||
"src/CelerisLab/lbm/kernels/boundary/outlet/pressure_neq.cuh": "c8b2adc66d12fe602076ddc9693c5c208711fcaddb58aa9a31401a269f51c4c4",
|
||||
"src/CelerisLab/lbm/kernels/boundary/planar_velocity.cuh": "501b2759d0e2e4280cb6fdd127d66a50fa89f6de48fc2cae9a7eafb11ae90bed",
|
||||
"src/CelerisLab/lbm/kernels/config.h": "7d1124125e0b354558297934460e64c760fb68cdd7bf6d01a1238bb2eaab8c37",
|
||||
"src/CelerisLab/lbm/kernels/config/config_grid.h": "1db3e030ebdc116cd7f02362d1fd077daac55e8f0b4329f6285948c224d3ca5d",
|
||||
"src/CelerisLab/lbm/kernels/config/config_method.h": "4374e04a130f90f97d17cc20c40d2f9ea0ed0dd8603817d07f215d02266e247c",
|
||||
"src/CelerisLab/lbm/kernels/config/config_objects.h": "db793af052c756561a190a3ff2cb93ee5fe28462ee4f97c6af80882b4dc8b072",
|
||||
"src/CelerisLab/lbm/kernels/config/config_obs.h": "c11e2249359145b5c4cbaaf0487506fa77c1f4b82c7c169ddc574aa0babcd727",
|
||||
"src/CelerisLab/lbm/kernels/config/config_physics.h": "8ac0990b168e1058588676cc05c80df8634cfd671dbc92a89246c3c372d83a4e",
|
||||
"src/CelerisLab/lbm/kernels/core/descriptors.cuh": "8440bc14857da9007982650f828a23608eec9f7cc4bf772e8c8dc1239cb45356",
|
||||
"src/CelerisLab/lbm/kernels/core/flags.cuh": "0025705f24710330d9d9195f713879bfb650a85a3449baef0e196b831af104ab",
|
||||
"src/CelerisLab/lbm/kernels/core/layout.cuh": "1fbd820021c89ac3efcde24145996cb0147769e607e498e61f308ed3e0b13706",
|
||||
"src/CelerisLab/lbm/kernels/core/obs.cuh": "b742b77c9f61e1f020fe9922c3838ae9d855e17b381154958b58f10a22938922",
|
||||
"src/CelerisLab/lbm/kernels/core/params.cuh": "6e18bf730d936d940e3d85452f0714a2eaae31bf41002f9fd520ec5b372878dd",
|
||||
"src/CelerisLab/lbm/kernels/core/precision.cuh": "849df14b4cce50af52399e4b8f3e997196f3ae5f1163f68e28df3e6b2507a8c4",
|
||||
"src/CelerisLab/lbm/kernels/kernel_v2.cu": "c7bd3fb705b77261ba2441c52a24a7e6a7865c165cba088a1b75201c4d29c408",
|
||||
"src/CelerisLab/lbm/kernels/operators/collision_mrt.cuh": "aee444eb60c47a3fd518dca975d1af05425a0818a0ec6c3fb3f6150f60c2cb44",
|
||||
"src/CelerisLab/lbm/kernels/operators/collision_srt.cuh": "6b7ff842f392c8f853d2d1a97cc69bfe50f21283f73e659404da07cf6c95f5e1",
|
||||
"src/CelerisLab/lbm/kernels/operators/collision_trt.cuh": "9725b9840b9ad8b4ec7be61ff5d06d3151e86d1a87585c13f2fbf934d0d2c5f6",
|
||||
"src/CelerisLab/lbm/kernels/operators/forcing_guo.cuh": "969a430c1af03f32e3bd0df95d805e64f56334717c44dd4ba208ba503062a24b",
|
||||
"src/CelerisLab/lbm/kernels/operators/helpers.cuh": "0b3a4d95d7d19f5fec09e5423b8f4cc99f8a226b541967425967330da5a051ec",
|
||||
"src/CelerisLab/lbm/kernels/operators/macro.cuh": "2be20eb2b7d7f5522daaad7f4b57b1ff8cdf883efe4a67846a96783b2fe846a3",
|
||||
"src/CelerisLab/lbm/kernels/operators/turbulence_smag.cuh": "ff7f000297ee0817e255ad9fcb6a13b647e3ddd5b206518d35f38d2895a9f501",
|
||||
"src/CelerisLab/lbm/kernels/refinement.cu": "129f3d91da93b4324f88a0da73a4da1e5390f72c14cce574ee63306712da9895",
|
||||
"src/CelerisLab/lbm/kernels/step/aux_kernels.cu": "578a5b20a157241ee678547059abb1372dd5a589ad06bb2c15b987eb01ca1013",
|
||||
"src/CelerisLab/lbm/kernels/step/block_channel.cu": "befbf6d757e532a59c166d41f920d16d71557cd3a574478e7aa83da737c48cbd",
|
||||
"src/CelerisLab/lbm/kernels/step/curved_double.cu": "bfa7a1df1e939020314d49755045f7a85fe4a19cc1c68dbe62653c66c5e7c2b3",
|
||||
"src/CelerisLab/lbm/kernels/step/esopull_macro.cu": "c73116020ca217ede1e4de27c8269c31f9d91e33433ac8252a21e9b14187c50f",
|
||||
"src/CelerisLab/lbm/kernels/step/esopull_sync.cu": "c0ff3e72900c3ab89a05dd03684e96d3b740cf1672d565727fc2af165933d087",
|
||||
"src/CelerisLab/lbm/kernels/step/init_flow.cu": "305be3bb12fc0d039acec1701baabcf0e8a35e683c49c34f2af8ca9867d2b29c",
|
||||
"src/CelerisLab/lbm/kernels/step/one_step_double.cu": "f9f8242b38e8e0cf8425b75e2b0215bc15363c62eaa0fb43c761b8e0931bfdc9",
|
||||
"src/CelerisLab/lbm/kernels/step/one_step_esopull.cu": "aa223b2744ae6c9125673df311a96ce588032c1ba58bebb11fd33ecb990f8ed4",
|
||||
"src/CelerisLab/lbm/kernels/streaming/esopull_semantic_helpers.cuh": "dd5a9091628b079efd97e53fd49e52d09dcee88529235db77a5648e02937af6e",
|
||||
"src/CelerisLab/lbm/kernels/streaming/esopull_single_buffer.cuh": "77ed4ab9a0ebc5ff62a91a7c39066ef395391ae36e9040a69fb2bd8b1626dc79",
|
||||
"src/CelerisLab/lbm/kernels/streaming/pull_double_buffer.cuh": "b65d741ed78b7b62f99531ba0c0ce1936663d8dc9640e7d7d16c707f1baf6549",
|
||||
"src/CelerisLab/lbm/population_storage.py": "a6a86c29c52c892edfe4802fb773c387212e3f4cc86708d80e154986ddf88044",
|
||||
"src/CelerisLab/lbm/raw_exchange.py": "8694202466eba848563e298656353b0f5db94e21a01fa05f51aad6dc2b9fd311",
|
||||
"src/CelerisLab/lbm/refinement.py": "08c2a0557276a98cbcaa459d9bb7a9735d8bbbf64a6114c57af2fda61481a687",
|
||||
"src/CelerisLab/lbm/refinement_stepper.py": "f2bb34fa90805ad21c3e7cf9f9a67d88d3ae3e249b4517d3898567b4bf9e364d",
|
||||
"src/CelerisLab/lbm/refinement_tables.py": "fdd344024b89df3a83174dc810ca5e32db5e19eb8b1609f8f73b0821f56546b6",
|
||||
"src/CelerisLab/lbm/stepper.py": "0dcb7cd7ae87e33e3dc67a38b6aa43042fbe673e37d9ad165342ee1d695933ce",
|
||||
"src/CelerisLab/lbm/synchronized_remap.py": "7400fc4beaffd4649d6a9c524d38ce5fd6fa7eeb32eb5332e4030a4b6648f197",
|
||||
"src/CelerisLab/simulation.py": "0a03904dc6de88667d7af699005a289adf8b09f0976cb0d099b041f4830a8f4c",
|
||||
"tests/validation/data/refined_dfg/source_manifest.json": "e495948b10f8112c77ca67255122b5e8bc9e32570e8c899802afcb85e608fef4",
|
||||
"tests/validation/periodic.py": "a2212c0e2705126327a5019e9cafe64eeca398da1b75061ff23630c9843697a6",
|
||||
"tests/validation/re100_helpers.py": "289c6e01075ff361573f862b90cfd61e5980c9a8efcbc78aef69979b4004fd60",
|
||||
"tests/validation/run_refined_dfg.py": "256aacd84b3f8412a31ffaba9c4b5635db895c3177686dd34ef8e31f08119414",
|
||||
"tests/validation/source_provenance.py": "6dfe8f2d819dba0e240ba761d31162a5033685d492d09db75eb2b8aaab3a5a4c"
|
||||
}
|
||||
}
|
||||
@@ -0,0 +1,100 @@
|
||||
"""CPU-only synthetic diagnostic and source-contract tests; no simulation results."""
|
||||
import json
|
||||
from pathlib import Path
|
||||
import sys
|
||||
from tempfile import TemporaryDirectory
|
||||
import unittest
|
||||
import numpy as np
|
||||
sys.path.insert(0,str(Path(__file__).resolve().parent))
|
||||
import diagnose_uniform_srt as d
|
||||
cfg,body,p,manifest=d.source_config(d.DEFAULT_SOURCE)
|
||||
|
||||
|
||||
def fixture():
|
||||
flags=np.ones((12,20),np.uint16)
|
||||
flags[:,0]=2|0x20; flags[:,-1]=2|0x30
|
||||
flags[[0,-1]]=2|0x10; flags[5,6]=2|0x40|0x200
|
||||
g=np.full((9,12,20),1/9,np.float32)
|
||||
macro=dict(rho=np.ones((12,20)),ux=np.zeros((12,20)),uy=np.zeros((12,20)))
|
||||
params=dict(center=[6,5],radius=1,dx=.1,mean_speed=.01,diameter=80)
|
||||
return g,macro,flags,params
|
||||
|
||||
|
||||
def test_exact_config_and_source():
|
||||
assert manifest['commit']=='9805383f9c50d867e8555471baf5dbda8333a652'
|
||||
assert p['diameter']==80 and p['mean_speed']==.01 and p['nx']==1761 and p['ny']==330
|
||||
assert cfg['method']['collision']=='SRT' and cfg['method']['ddf_shifting']
|
||||
assert cfg['method']['outlet']['srt_neq_damp']==.5
|
||||
assert np.isclose(3*p['viscosity']+.5,.524)
|
||||
assert body['objects'][0]['center']==[160,160.5]
|
||||
|
||||
|
||||
def test_inactive_nonfinite_does_not_fail():
|
||||
g,m,f,p=fixture(); fluid,_=d.categories(f,p)
|
||||
g[:,~fluid]=np.nan
|
||||
for a in m.values(): a[~fluid]=np.nan
|
||||
r=d.diagnose(g,m,np.zeros(2),f,p,1)
|
||||
assert not r['physical_failure']
|
||||
assert r['categories']['body_solid']['nonfinite_population_nodes']==1
|
||||
assert r['categories']['outlet_ghost']['nodes']==10
|
||||
assert r['categories']['inlet_ghost']['nodes']==10
|
||||
json.dumps(r,allow_nan=False)
|
||||
|
||||
|
||||
def test_population_macro_force_separate():
|
||||
g,m,f,p=fixture(); g[4,6,17]=np.inf
|
||||
r=d.diagnose(g,m,np.zeros(2),f,p,27)
|
||||
assert r['physical_failure'] and r['physical_population_nonfinite']
|
||||
assert not r['original_health_failure'] and not r['force_nonfinite']
|
||||
assert r['first_physical_examples'][0]['category']=='outlet_near'
|
||||
assert r['first_physical_examples'][0]['nonfinite_q']==[4]
|
||||
assert r['first_physical_examples'][0]['populations'][4]=='+Inf'
|
||||
json.dumps(r,allow_nan=False)
|
||||
g,m,f,p=fixture(); m['ux'][6,10]=np.nan
|
||||
r=d.diagnose(g,m,np.zeros(2),f,p,28)
|
||||
assert r['physical_macro_nonfinite'] and not r['physical_population_nonfinite']
|
||||
assert not r['force_nonfinite'] and r['original_health_failure']
|
||||
g,m,f,p=fixture(); r=d.diagnose(g,m,np.array([np.nan,0]),f,p,29)
|
||||
assert r['force_nonfinite'] and not r['physical_macro_nonfinite']
|
||||
assert not r['first_physical_examples']
|
||||
|
||||
|
||||
def test_original_safety_limits():
|
||||
g,m,f,p=fixture(); m['rho'][5,7]=.49
|
||||
r=d.diagnose(g,m,[0,0],f,p,1)
|
||||
assert r['density_limit'] and r['first_physical_examples'][0]['category']=='body_near'
|
||||
g,m,f,p=fixture(); m['ux'][6,10]=.2
|
||||
assert d.diagnose(g,m,[0,0],f,p,1)['mach_limit']
|
||||
|
||||
|
||||
def test_disjoint_complete_categories():
|
||||
_,_,f,p=fixture(); fluid,masks=d.categories(f,p)
|
||||
np.testing.assert_array_equal(sum(mask.astype(int) for mask in masks.values()),np.ones(f.shape))
|
||||
physical=sum(masks[k].astype(int) for k in ('body_near','inlet_near','outlet_near','wall_near','bulk'))
|
||||
np.testing.assert_array_equal(physical,fluid.astype(int))
|
||||
|
||||
|
||||
def test_bounded_state_evidence():
|
||||
g,m,f,p=fixture(); state=dict(raw=g.copy(),g=g,macro=m,step=1)
|
||||
with TemporaryDirectory() as tmp:
|
||||
dest=Path(tmp); size=d.save_states(dest,state,state,f,{'status':'synthetic_test'})
|
||||
assert size<d.LIMIT_BYTES
|
||||
with np.load(dest/'states.npz') as saved:
|
||||
np.testing.assert_array_equal(saved['previous_raw_shifted'],g)
|
||||
np.testing.assert_array_equal(saved['current_physical'],g)
|
||||
assert sorted(x.name for x in dest.iterdir())==['diagnostics.json','states.npz']
|
||||
actual_bytes=4*(9*330*1761*4)+(330*1761*2)+16
|
||||
assert actual_bytes<d.LIMIT_BYTES-4*1024**2
|
||||
|
||||
|
||||
def test_source_guard_and_deadline():
|
||||
with TemporaryDirectory() as tmp:
|
||||
with unittest.TestCase().assertRaises((ValueError,FileNotFoundError)):
|
||||
d.source_config(Path(tmp))
|
||||
with unittest.TestCase().assertRaises(TimeoutError): d.deadline_check(0)
|
||||
|
||||
|
||||
if __name__=='__main__':
|
||||
result=unittest.TextTestRunner(verbosity=2).run(unittest.TestSuite(
|
||||
unittest.FunctionTestCase(fn) for name,fn in sorted(globals().items()) if name.startswith('test_')))
|
||||
raise SystemExit(not result.wasSuccessful())
|
||||
Reference in new issue
Block a user