Revise the JFM research workflow documentation to clarify project structure, decision-making processes, and tool routing. Remove outdated figures and images that are no longer relevant to the current manuscript. Ensure that the workflow aligns with the latest research objectives and safety protocols.
28 lines
2.8 KiB
Plaintext
28 lines
2.8 KiB
Plaintext
---
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description: General JFM startup, authority, memory, literature, and safety routing
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alwaysApply: true
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---
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# JFM Research Start and Tool Routing
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## Start from the assigned unit
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- Name the project, active round, exact unit, deliverable, output, and exclusions. R1 indexes evidence; R2 designs; R3 builds dossiers; R4 freezes arguments/displays; R5 writes admitted section prose and controls from frozen R4 packets.
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- Read fresh supplied context once. Follow the coordinator packet's exact reads, ownership, limits, questions, and acceptance checks; do not rediscover the project or recreate R1 coverage.
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## Recall, then verify
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- Use 2–3 narrow Nowledge `memory_search` queries containing `DynamisLab JFM` plus round, section/unit, and decision/claim/term. Use `thread_search` and scoped `thread_fetch_messages` only when exact prior wording or conversation history is needed.
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- Memory navigates decisions; `mem_fs` may locate source/original text only when actually stored, with source state retained. It is not a general full-text corpus.
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- R1–R4 indexes, dossiers, plans, controls, and figure plans route architecture, ownership, ceilings, and fallbacks; they do not establish a new internal fact or verify/promote an artifact.
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- Bind internal facts/numbers to current package authority, manifest, code/configuration, or immutable artifact. If unbound, omit, use the frozen fallback, mark an authorized placeholder, or report the gate. Current authority overrides memory and summaries.
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- Search before `memory_add`; update rather than duplicate. Save only durable decisions, procedures, or lessons.
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## Literature and tool routing
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- For Undermind: run `get_orientation`, list/select the DynamisLab workspace, inspect existing folders/files/searches, search the library first, and broaden only if needed. Confirm identity, DOI, and availability with `get_paper_info`.
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- Keep each `read_pdfs` request bounded and self-contained: identify the papers/pages or question, request only necessary passages, and preserve `full-PDF`, `full-report`, `mapped`, `snippet`, or `inaccessible` state. Mapped/snippet evidence cannot support detailed wording or structural claims.
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- Literature supports external propositions and rhetorical/structural diagnosis only; it never verifies internal results, numbers, artifacts, priority, readiness, or claim ceilings.
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- Before any authorized read-only script, discover and use the repository-designated environment and documented entry point; do not guess an environment or install/change dependencies.
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## Safety and closeout
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- Do not run CFD, training, artifact generation, or expensive/new analysis without explicit authorization. Never fill an evidence gate by inference.
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- Close out whether Working Memory, durable memory, thread recall, `mem_fs`, scripts, and literature were used, distinguishing `read`, `mapped`, and independently verified/audited evidence.
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