Revise the JFM research workflow documentation to clarify project structure, decision-making processes, and tool routing. Remove outdated figures and images that are no longer relevant to the current manuscript. Ensure that the workflow aligns with the latest research objectives and safety protocols.
Track the research dossiers, section freezes, supporting manuscript materials, and round-aware agent controls so future drafting decisions can be reviewed across both repository mirrors.
Co-authored-by: Cursor <cursoragent@cursor.com>
Add a canonical src package index, synchronize cross-project status and root navigation, and ignore local generated/runtime payloads while preserving the documented solver and evidence boundaries.
Co-authored-by: Cursor <cursoragent@cursor.com>
Freeze the contract-audited discovery, closed-loop validation, robustness, plotting, and manuscript evidence so the SR section is reproducible and ready for paper development.
Co-authored-by: Cursor <cursoragent@cursor.com>
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