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refactor(workflow): update JFM research workflow and remove obsolete figures

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Revise the JFM research workflow documentation to clarify project structure, decision-making processes, and tool routing. Remove outdated figures and images that are no longer relevant to the current manuscript. Ensure that the workflow aligns with the latest research objectives and safety protocols.
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Frank14f
2026-08-11 21:25:33 +08:00
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docs/JFM_WYQ/FIGURE_PLANS/SECTION_02_EQUATION_SPEC.md
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# Section 2 equation specification
## Required equations
1. `Re_D=Uref D/nu`; bulk/mean `Uref` for parabolic inflow, uniform speed for uniform inflow, and `Umax ~= 1.5 Uref`. Parabolic inherited labels remain unconverted until source metadata bind `U0`.
2. `(Uw,Vw)=(-omega r_y, omega r_x)`, positive omega counter-clockwise; `s_i=omega_i R/Uref`. Historical source-native `alpha_i=omega_i/U0`; general `s_i=alpha_i R(U0/Uref)`, reducing to `alpha_i R` only when `U0=Uref` is established.
3. Online objective: compact force plus sparse-sensor discrepancy; exact weights optional and run-bound.
4. Mean field L2: area/coordinate-weighted, `Uref`-normalized vector error over declared ROI with roles/comparator explicit.
5. Phase L2: same spatial contract by periodic slot; slots are not repeated-cycle samples.
6. DTW recurrence/path or rigorous prose; state distance/similarity, normalization, channels, aggregation, window and constraints.
7. Comparator-relative reduction optional only under one exact role/ROI/mask/weight/window contract.
## Readiness contract
Authority is frozen Section 2 plus the sensor/field report. Equations 1–2 are configuration definitions; 3–7 require result-local chain/config/case/seed/role/comparator bindings. ROI/mask/weight/window are `N/A: physical/method definition` for 1–3 and mandatory for 4–7. Action sign/order and metric orientation accompany reuse. Implementation constants and rows are `dependency-gated`; no equation implies an artifact. Caption ceiling is definitions only. Fallback retains Reynolds, action, mean L2 and rigorous prose DTW; recurrence/detail may move to supplement.
Plan `specified`; evidence `read`; metric `definition-ready`; render `N/A: typeset equations, not artifact panels`; disposition `retain-with-gates`.