research: reuse quadrature and clarify snapshot and VIV coordinates
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@@ -394,6 +394,12 @@ before `run()`, the force will be reset to zero. For the common usage pattern
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| `sim.load_checkpoint(path)` | Restore from HDF5 (config must match) |
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| `sim.load_checkpoint(path)` | Restore from HDF5 (config must match) |
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| `sim.snapshot()` / `sim.restore()` | In-memory field snapshot |
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| `sim.snapshot()` / `sim.restore()` | In-memory field snapshot |
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In-memory snapshots save populations only. Restore keeps the current clock,
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controls, observations, geometry and flags; use it only while geometry is
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unchanged. This is not a restart or an FSI rollback. In particular, do not
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restore a snapshot taken before a translating circle changed position.
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This geometry restriction is a caller precondition, not a runtime check.
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#### Low-level access
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#### Low-level access
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| Attribute | Description |
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| Attribute | Description |
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@@ -30,6 +30,10 @@ cells (M1 `MovingCircleCells`), moving-wall Bouzidi with wall velocity
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mass, eq_only, no_donor, crossings) accumulated since obs were zeroed;
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mass, eq_only, no_donor, crossings) accumulated since obs were zeroed;
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`obs`/`read_force` keep their contract (CME on the body).
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`obs`/`read_force` keep their contract (CME on the body).
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- `get_flags()` reads device flags back when moving circles exist.
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- `get_flags()` reads device flags back when moving circles exist.
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- `snapshot()` / `restore()` save and restore populations only, keeping the
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current clock, controls, observations, geometry and flags. Use them only
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with unchanged geometry; restoring across a translation is unsupported
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and is not rejected at runtime. They do not provide FSI rollback.
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*Supported:* dense double buffer, D2Q9, FP32 unshifted, SRT/MRT, circles,
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*Supported:* dense double buffer, D2Q9, FP32 unshifted, SRT/MRT, circles,
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spin. *Rejected before mutation:* EsoPull, ddf shifting, D3Q19, refinement /
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spin. *Rejected before mutation:* EsoPull, ddf shifting, D3Q19, refinement /
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@@ -29,10 +29,17 @@ Claude, Grok and Astra at 1abfe954; implemented in research/viv_re150/.
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- D = 40, MRT, dense double buffer; U_lat = .04, nu = U D / 150 = .010667,
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- D = 40, MRT, dense double buffer; U_lat = .04, nu = U D / 150 = .010667,
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tau = .532.
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tau = .532.
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- Box [0, 75 D] × [0, 60 D] (3000 × 2400) with the cylinder centre at
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- Nominal 75 D × 60 D lattice allocation (3000 × 2400), based on the
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(30 D, 30 D): 30 D from the inlet, 45 D from the outlet, centred in y
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Kolahdouz §4.1.1 layout. Coordinate clarification of the existing run:
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(Kolahdouz §4.1.1). Qin's own box ([0, 40 D] × [0, 20 D], centre (10 D, 10 D))
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the driver uses `(30 D, (ny - 1)/2)` = `(1200, 1199.5)` in lattice
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is the target paper's, not ours.
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coordinates, or `(30 D, 29.9875 D)`. The earlier `(30 D, 30 D)` wording
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described the nominal box, not the exact executed centre.
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Free-slip reflection planes are at `y = .5` and `y = ny - 1.5 = 2398.5`;
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their separation is 2398 cells = 59.95 D, with the centre exactly midway,
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29.975 D from each wall. Node counts are not physical wall-to-wall lengths.
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This corrects the description, without changing the historical geometry
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or results. Qin's own box ([0, 40 D] × [0, 20 D], centre (10 D, 10 D)) is
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the target paper's, not ours.
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- Boundaries: uniform Zou–He inlet, NEQ outlet (rho = 1, backflow clamp),
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- Boundaries: uniform Zou–He inlet, NEQ outlet (rho = 1, backflow clamp),
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free-slip y walls. Kolahdouz uses a traction outlet: declared mismatch.
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free-slip y walls. Kolahdouz uses a traction outlet: declared mismatch.
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- Qin's own VIV box (40 D × 20 D) is not used; a smaller box would be a
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- Qin's own VIV box (40 D × 20 D) is not used; a smaller box would be a
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@@ -8,6 +8,7 @@ s/T in [0.25 + (k-1), 0.25 + k); cycle 0 is the startup quarter.
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from __future__ import annotations
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from __future__ import annotations
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import math
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import math
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from functools import lru_cache
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import numpy as np
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import numpy as np
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@@ -53,10 +54,16 @@ def bin_phase(s, T):
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return None
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return None
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@lru_cache(maxsize=8)
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def _quadrature_rule(points):
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"""Reuse the nodes and weights, which depend only on quadrature order."""
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return np.polynomial.legendre.leggauss(points)
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def interval_bases(n, T, points=16):
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def interval_bases(n, T, points=16):
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"""Single-step interval averages over [n, n + 1] of cos phi |cos phi| and sin phi
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"""Single-step interval averages over [n, n + 1] of cos phi |cos phi| and sin phi
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(phi in radians = 2 pi s / T - pi / 2), Gauss-Legendre quadrature."""
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(phi in radians = 2 pi s / T - pi / 2), Gauss-Legendre quadrature."""
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x, w = np.polynomial.legendre.leggauss(points)
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x, w = _quadrature_rule(points)
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s = int(n) % T + 0.5 * (x + 1.0) # periodic: identical bases in every cycle
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s = int(n) % T + 0.5 * (x + 1.0) # periodic: identical bases in every cycle
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phi = 2.0 * np.pi * s / T - 0.5 * np.pi
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phi = 2.0 * np.pi * s / T - 0.5 * np.pi
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c = np.cos(phi)
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c = np.cos(phi)
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@@ -1,8 +1,9 @@
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"""One-shot predeclared VIV run (docs/validation/viv_re150_predeclare.md).
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"""One-shot predeclared VIV run (docs/validation/viv_re150_predeclare.md).
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Re 150, U* = 5, m/(rho D^2) = 2, zeta = 0, D = 40 on a 75 D x 60 D native
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Re 150, U* = 5, m/(rho D^2) = 2, zeta = 0, D = 40 on a nominal 75 D x 60 D
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channel (uniform inlet, NEQ outlet, free-slip y walls), cylinder at
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lattice (uniform inlet, NEQ outlet, free-slip y walls). The cylinder is at
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(30 D, 30 D). Structural RHS = CME + Wen (diagnostics: raw CME, node terms).
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(30 D, (ny - 1)/2); y-wall planes are .5 and ny - 1.5 in lattice coordinates.
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Structural RHS = CME + Wen (diagnostics: raw CME, node terms).
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Research driver only: Simulation API, no production change.
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Research driver only: Simulation API, no production change.
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PYTHONPATH=src python research/viv_re150/run.py --out /path/outside/checkout
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PYTHONPATH=src python research/viv_re150/run.py --out /path/outside/checkout
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@@ -82,6 +82,35 @@ def test_interval_bases_and_morison_fit_recover_known_coefficients():
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assert p.morison_fit(f, b[:, 0], b[:, 1]) == pytest.approx((2.09, 1.45), abs=1e-9)
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assert p.morison_fit(f, b[:, 0], b[:, 1]) == pytest.approx((2.09, 1.45), abs=1e-9)
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def test_quadrature_rule_reused_across_steps_and_periods(monkeypatch):
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original = np.polynomial.legendre.leggauss
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orders = []
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def counted(points):
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orders.append(points)
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return original(points)
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p._quadrature_rule.cache_clear()
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monkeypatch.setattr(np.polynomial.legendre, "leggauss", counted)
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try:
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for points in (16, 8, 16):
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for period in (T, 2 * T):
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for n in (0, 123, period + 123):
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p.interval_bases(n, period, points)
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assert orders == [16, 8]
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finally:
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p._quadrature_rule.cache_clear()
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def test_interval_sine_basis_matches_exact_integral():
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for period in (T, 2 * T):
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half_width = math.pi / period
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for n in (0, period // 4, period // 2, period - 1, 7 * period + 123):
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midpoint = 2 * math.pi * ((n % period) + .5) / period - math.pi / 2
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expected = math.sin(midpoint) * math.sin(half_width) / half_width
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assert p.interval_bases(n, period)[1] == pytest.approx(expected, rel=0, abs=2e-15)
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def test_geometry_repeats_exactly_across_cycles():
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def test_geometry_repeats_exactly_across_cycles():
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A = p.amplitude(20)
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A = p.amplitude(20)
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for m in (0, 1, T // 4, T // 2 - 1, 7 * T // 12):
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for m in (0, 1, T // 4, T // 2 - 1, 7 * T // 12):
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